Protein

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Genbank accession
QIW87116.1 [GenBank]
Protein name
baseplate wedge tail fiber connector
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MSIQQPKILVDTGDEGVEGTGDTLYQGGTSINRNLNSLYNAFGDYRIFRADANQGNQQMTIHSGGYYQKHTRSYYSGQENPSGNPVDFGSMHDLSVTRDGAGDLIVTLPAGNGHAGEYIDFINIDGSIGLGAGKEVTIRTSGSGDSIGLAGTQMKLQKSYFHLRLWVDKSSPTGSHWAFKMDSVIGDTSIPYQTTISNIAAGTTKEVVLFNKSQYNLTKHLIHVTERGSNIRQEASEVLLMVNNSGPDTNVYSTEYARIRTAPTANSKSDLLYESEYIVSGTQVKLVVKNIGTLAIDVYIKAIEAIGGLS
Physico‐chemical
properties
protein length:310 AA
molecular weight: 33534,91360 Da
isoelectric point:5,74377
aromaticity:0,08065
hydropathy:-0,33968

Domains

Domains [InterPro]
IPR036240
STR
1–306
IPR036240
IPR008987
ATT
9–184
IPR008987 IPR027412
G3DSA:1.20.5.960
Unmapped
18–50
G3DSA:1.20.5.960 IPR027411
QIW87116.1
1 310
Architecture
ATT
STR
ATT 1-184 | STR 185-306 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW87116.1
1 310
Domain Start End Length (AA) Confidence
N-terminal 1 104 104 0,7514
Central domain 105 299 196 0,0046
C-terminal 300 310 10 0,9955
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-104
Central
105-299
C-terminal
300-310

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Ahp1_CNU-2021
[NCBI] 		2814919 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW87116.1 [NCBI]
Genbank nucleotide accession
MT161459 [NCBI]
CDS location
range 191036 -> 191968
strand -
CDS
ATGTCAATACAACAACCAAAGATCCTCGTTGATACTGGCGATGAGGGCGTTGAAGGCACTGGCGACACTCTGTACCAAGGTGGTACGAGCATCAACCGCAACTTGAATAGTCTTTATAACGCGTTTGGAGACTATCGCATCTTCCGTGCCGATGCAAACCAAGGCAACCAACAGATGACTATCCACTCCGGTGGATATTACCAGAAGCATACTCGGTCGTACTACTCCGGTCAAGAAAACCCAAGCGGAAACCCCGTTGATTTTGGATCCATGCACGATCTATCCGTAACGCGAGATGGTGCAGGTGACTTGATTGTCACACTTCCAGCTGGGAATGGTCACGCTGGCGAGTACATCGATTTCATTAACATTGATGGATCTATCGGTCTAGGCGCTGGTAAAGAAGTGACGATCCGTACATCGGGGTCTGGTGATAGCATTGGGCTAGCTGGTACTCAGATGAAGCTGCAAAAATCCTACTTCCATCTCCGGTTGTGGGTCGATAAATCTAGTCCAACTGGATCCCACTGGGCGTTCAAAATGGATAGCGTTATTGGGGACACCAGCATTCCTTACCAGACGACGATCTCCAACATTGCTGCTGGCACTACCAAAGAAGTTGTGCTGTTCAACAAGTCGCAATACAACTTGACCAAGCACTTGATTCACGTAACTGAACGCGGGTCCAACATTCGTCAAGAGGCGAGCGAAGTTCTGCTGATGGTAAATAACAGTGGACCAGACACTAACGTGTATTCAACGGAATACGCCAGAATTCGCACCGCGCCAACCGCCAACTCGAAGAGCGATCTGCTGTACGAGAGTGAGTACATCGTCAGCGGAACTCAGGTGAAGTTGGTCGTGAAGAACATCGGCACACTAGCTATCGACGTCTACATTAAAGCGATCGAAGCAATCGGAGGCTTATCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c65f74faaf0097dc44d026c1b4b83c600d73ddfac2942b9f2aca6d4261115fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7177
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila lytic bacteriophage AHP-1 Nikapitiya,C., Senevirathne,A., Lee,J. and Zoysa,M.D. 2022-03-16 — GenBank