Protein

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Genbank accession
WPJ21677.1 [GenBank]
Protein name
depolymerase 1
RBP type
TSP
Evidence RBPdetect
Probability 0,50
Protein sequence
MDQEIKTAIQYPTGSTEFDIPFDYLSRKFVRVSLVADDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERIVDFSDGSVLRAADLNVSQIQSAHIAEEARDAALMAMPEDDAGNLDARNRKIVRLAPGESGTDAINKNQLDETLGEAGGILSDFEDVRDEIIQYISKFTDDTGAVRGVSYVYNNGRALGGETGFHIDITPPPLGVPYLSINGSKQYRGYHFTYDPITGNVQGLATPLEKDDFVVATTTESVTPIEDLYASTQGASMIGTLSGSTVEERIAEVEQSVLDSIDGIRVDSFIGMTCRDVNSTGQISGVNALLTGKVMLTGLSSAIPTTPGTVYVDSNGNLKVKL
Physico‐chemical
properties
protein length:361 AA
molecular weight: 39234,34820 Da
isoelectric point:4,62768
aromaticity:0,06925
hydropathy:-0,22798

Domains

Domains [InterPro]
DC_0778
STR
1–358
DC_0778
IPR005604
ATT
5–127
IPR005604
WPJ21677.1
1 361
Architecture
ATT
STR
ATT 1-127 | STR 128-358 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ21677.1
1 361
Domain Start End Length (AA) Confidence
N-terminal 1 323 323 0,9913
Central domain 324 350 28 0,1304
C-terminal 351 361 10 0,9885
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-323
Central
324-350
C-terminal
351-361

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage 515
[NCBI] 		3092553 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ21677.1 [NCBI]
Genbank nucleotide accession
OR645408 [NCBI]
CDS location
range 31055 -> 32140
strand +
CDS
ATGGACCAAGAAATTAAAACAGCCATCCAGTACCCCACAGGGTCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTAGCTGACGACAACCGCAGACTGCTGAGTAACATCACTGAGTACCGCTACGTGTCCAAGACCAGAGTGAAGCTCCTTGTGGAAACTACTGGGTTCGACCGTGTGGAAATCCGTAGGTTCACCTCAGCGTCTGAGAGAATCGTTGACTTCAGTGATGGCTCGGTTCTCCGCGCTGCTGACCTTAACGTATCTCAGATACAGTCAGCTCACATTGCCGAAGAAGCGAGGGACGCTGCACTAATGGCCATGCCAGAGGATGATGCAGGTAACTTAGATGCCCGCAACAGGAAGATTGTCAGACTGGCTCCGGGAGAGTCTGGAACAGATGCCATAAACAAGAACCAGTTAGATGAGACTCTTGGGGAAGCTGGTGGCATCCTGTCAGACTTTGAGGATGTGCGCGATGAGATTATTCAGTACATATCCAAGTTCACGGATGACACCGGGGCTGTACGCGGAGTATCTTACGTGTACAACAACGGGAGAGCACTTGGTGGTGAGACTGGTTTTCACATCGATATTACGCCACCTCCGCTAGGTGTTCCGTACTTGTCGATAAACGGTAGCAAGCAATATCGGGGATATCACTTCACGTATGACCCGATTACTGGTAACGTGCAAGGACTGGCGACGCCACTGGAAAAAGATGACTTCGTGGTTGCCACTACCACAGAGAGCGTAACACCAATAGAGGATTTATACGCCAGCACACAAGGTGCATCCATGATAGGAACATTGAGTGGTAGCACTGTGGAGGAGCGCATAGCTGAAGTAGAACAGAGCGTTCTTGACTCAATAGACGGAATCCGAGTTGATAGCTTCATCGGGATGACGTGTCGTGACGTTAACTCTACAGGACAGATTAGCGGAGTCAATGCTCTACTTACTGGTAAAGTTATGTTAACTGGACTCAGTTCCGCTATACCAACCACTCCGGGCACCGTGTACGTCGATTCCAACGGTAACCTGAAAGTAAAACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f272ffdfabe0109765275d927914be4d5a5b9c3263631447751eda86173e2b0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7963
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50