Protein

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Genbank accession
YP_009600163.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTVEILPPNASVDVELTTGVGVNVQTTEFTATFGTISVEIATNQGTAGLTAYQIAINNGFEGTEAEWLASLQGPAGADVYVHTQSEPAAVWTINHNLGSYPNVYVLDTAGDECEGDVDNPTVNQTVITFSASFAGTARLV
Physico‐chemical
properties
protein length:140 AA
molecular weight: 14610,84540 Da
isoelectric point:4,05003
aromaticity:0,07857
hydropathy:0,09071

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dinoroseobacter phage vB_DshS-R5C
[NCBI] 		1965368 Uroviricota > Caudoviricetes > Nanhaivirus >
Host Dinoroseobacter shibae
[NCBI] 		215813 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009600163.1 [NCBI]
Genbank nucleotide accession
NC_041921.1 [NCBI]
CDS location
range 14399 -> 14821
strand +
CDS
TTGACGGTCGAGATCCTTCCTCCGAATGCCTCGGTGGACGTCGAGCTCACCACTGGCGTGGGCGTCAACGTGCAGACCACCGAGTTCACCGCGACGTTCGGAACGATCTCGGTCGAGATCGCGACGAACCAGGGCACGGCTGGCTTGACGGCCTACCAGATTGCCATCAATAACGGCTTCGAAGGCACAGAGGCAGAGTGGTTGGCGTCGCTCCAAGGACCCGCAGGGGCAGACGTCTACGTTCACACGCAGAGCGAGCCTGCGGCGGTGTGGACAATCAACCACAATCTCGGATCTTATCCGAATGTCTACGTCCTCGACACAGCAGGCGACGAGTGCGAAGGCGACGTGGACAACCCCACCGTGAACCAAACGGTGATCACGTTCTCGGCATCCTTCGCGGGAACGGCACGGCTGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7afca05e443148e27d15b7eb0473a0f91c31f7d52cfd8840fb64891af0eb50fe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7306
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel roseosiphophage isolated from the oligotrophic South China Sea Yang,Y., Cai,L. and Zhang,R. — — GenBank