Protein

View in Explore
Genbank accession
QGZ13362.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLRLYKANETNFKNNGLGILKDAFETKVTEELNGLFELEFTYYVGSFLFDEIDYNKIVMADASPRLKNQLFRIYYISKELDGKILVKAEHISYDLLNNFIENLELKNVTCEEALNQIFRSCTEENRFVGYSDITGNKDFSISCVSPHNAISDIQELFNNKSKLKRDNFNISLLNNIGESNNVLLAYRKNIIGLTATYDTQEVITKIYPYATKKSGKNKKITLPEKYVESKYINNYPTQRIVAVDFSDYDIKNEESLRNKCKDYFIENNVDLPKVTYKVEFVDLSTTEDYKSYKMLETVNMDDEIIVRDYNLGINATARVVKTDYNPVLKKYNSVEIGDLVNHFKDERIDDLEEKIDKVQNNVDNIVIESDNFPDTLPEPSNVTALGLWSMIQLDWTFDNKLYYNYEVYASQIKGFEPDTTGYTNRIYVGQASSLLHEVKPMQTWYYRVRAGNTHDNYNEFSNEVSATTRKLSDAAEYFEEAAIGHAVIRDLDADKINVGKVKGQYIEAKNLVVVDGNSQTTLNIDSFGNVHVGATTFTLKGKSLESIIGGEIDNITQLEIFNKLTNNGLAKGLYMVGNELYLNASYIKTGTLEGQFINGRNLTVRDNDGYITLQVDSNGKVNIRANELSIGDKNNYESVLTSDQQAVFDALTGNRNCGIYLRGSRLYINADYIDTGTILCDKIGASSSNPRILLFSGNGAECAIDATALNGVGIGKSIRFQYDRSHYVAVDGSSINFYIGSTVIYNNFSRSRVYFYQDDIRWDSAQFDMSGALRLYTESGETGFVAWDDGNAAIYCRGRERHAFYSDGSKNGGSIEIDGTIFGMSPVDSPQTLIEDILFDVEVEETGTIVKLDSTYAKTISRYAVFPSNGKVEVVEKKDGYFKVSGYTGKVDFSVKGSRIDKEHEYFKIMGGEEQHGNF
Physico‐chemical
properties
protein length:919 AA
molecular weight: 103870,82820 Da
isoelectric point:4,95155
aromaticity:0,11208
hydropathy:-0,42416

Domains

Domains [InterPro]
DC_0109
STR
1–908
DC_0109
IPR007119
Unmapped
25–337
IPR007119 Coil IPR013783
IPR010572
ENZ
93–337
IPR010572
QGZ13362.1
1 919
Architecture
STR
STR 1-908 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ13362.1
1 919
Domain Start End Length (AA) Confidence
N-terminal 1 98 98 0,9660
Central domain 99 297 200 0,1063
C-terminal 298 919 621 0,2647
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-98
Central
99-297
C-terminal
298-919

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCDKH01
[NCBI] 		2686203 No lineage information
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ13362.1 [NCBI]
Genbank nucleotide accession
MN718463 [NCBI]
CDS location
range 38080 -> 40839
strand +
CDS
TTGCTTAGATTATATAAAGCAAATGAAACAAATTTTAAAAATAATGGTTTGGGGATTCTAAAAGATGCATTTGAAACAAAAGTTACAGAAGAATTAAATGGACTATTTGAGTTAGAGTTTACATATTATGTGGGCTCTTTTTTATTTGATGAAATTGATTATAATAAAATAGTTATGGCTGATGCTTCTCCAAGGCTTAAAAATCAATTATTTAGGATTTACTATATTTCTAAGGAACTTGATGGAAAAATATTAGTTAAAGCAGAACACATTAGTTATGATTTATTAAATAATTTTATAGAAAATTTAGAACTTAAAAATGTTACTTGTGAAGAAGCTCTTAATCAAATATTTAGGTCATGTACTGAAGAAAATAGATTTGTAGGATATTCAGATATAACAGGAAATAAAGACTTTTCAATATCTTGTGTAAGCCCACATAATGCTATATCTGACATACAAGAATTATTTAATAATAAGTCTAAACTAAAAAGAGATAATTTCAATATAAGTTTATTAAATAATATTGGAGAAAGTAACAATGTATTACTAGCATATAGGAAGAATATAATAGGTCTAACAGCTACTTATGATACACAAGAAGTTATAACTAAGATATATCCATATGCAACTAAAAAAAGTGGTAAAAATAAAAAAATTACACTACCAGAAAAATATGTAGAAAGCAAGTATATAAACAATTATCCAACTCAAAGAATTGTTGCAGTTGATTTTTCAGATTATGATATTAAGAATGAAGAAAGCTTAAGGAATAAATGTAAAGACTATTTTATTGAAAATAATGTTGATTTACCTAAAGTTACTTACAAAGTAGAATTTGTAGATTTATCAACTACAGAAGATTATAAAAGCTATAAGATGCTTGAAACTGTAAATATGGATGATGAGATAATAGTTAGAGATTATAACTTAGGTATAAATGCTACTGCAAGGGTAGTAAAAACTGACTATAATCCAGTATTAAAGAAATACAATTCGGTTGAGATTGGTGACTTAGTAAATCATTTTAAAGACGAAAGAATAGATGATTTAGAAGAAAAAATAGATAAGGTTCAAAATAATGTAGATAATATTGTAATTGAAAGTGATAATTTTCCGGATACACTTCCAGAACCTTCAAATGTCACAGCATTAGGGTTATGGAGTATGATTCAGTTAGATTGGACTTTTGATAATAAGTTATATTATAACTATGAAGTATATGCATCTCAAATAAAAGGATTTGAACCAGATACTACAGGATATACAAATAGGATATATGTGGGTCAAGCAAGTTCATTACTTCATGAAGTTAAGCCTATGCAAACTTGGTATTATAGAGTAAGGGCAGGAAATACACATGATAACTATAATGAATTTTCAAATGAAGTTAGTGCAACAACTAGAAAGTTAAGTGATGCAGCTGAATATTTTGAAGAAGCAGCTATAGGTCATGCAGTTATAAGAGATTTAGATGCAGATAAAATAAATGTAGGAAAAGTAAAAGGGCAGTATATTGAGGCAAAGAATTTAGTTGTAGTTGATGGAAATAGCCAGACAACTTTAAATATAGATAGTTTTGGAAATGTTCATGTAGGAGCAACTACCTTTACATTAAAAGGGAAGTCACTGGAATCTATTATTGGTGGAGAAATAGACAATATAACTCAACTTGAGATATTTAATAAACTAACTAACAATGGTCTTGCAAAGGGACTCTATATGGTTGGGAATGAGTTATATCTAAACGCTAGTTATATAAAAACTGGTACTTTAGAAGGTCAATTTATAAATGGTAGAAATTTAACTGTAAGAGATAATGATGGCTATATAACTTTACAAGTAGATAGTAATGGAAAAGTTAATATAAGAGCTAATGAATTGTCTATAGGTGATAAAAACAACTATGAAAGTGTTTTAACTAGTGACCAACAAGCAGTGTTTGATGCATTAACAGGAAATCGAAATTGTGGGATATATTTAAGAGGAAGTAGATTATATATAAATGCTGATTATATAGATACAGGTACTATTTTATGTGACAAAATAGGAGCTAGTTCATCAAACCCAAGAATATTACTTTTTTCAGGTAATGGAGCTGAATGTGCAATAGATGCTACTGCATTAAATGGTGTTGGGATAGGTAAATCAATTAGATTCCAGTATGATAGAAGTCACTATGTAGCTGTAGATGGTTCTTCAATAAATTTTTACATAGGTAGTACAGTTATTTACAATAACTTTTCTCGTTCAAGAGTTTATTTTTATCAAGATGATATAAGGTGGGATAGTGCACAATTTGATATGTCTGGTGCATTAAGATTGTATACTGAAAGTGGTGAAACTGGTTTTGTAGCATGGGATGATGGTAATGCTGCTATTTATTGTAGAGGAAGAGAAAGACATGCTTTTTATAGTGATGGAAGTAAAAATGGAGGTTCTATTGAAATTGATGGAACTATTTTTGGTATGTCACCAGTTGATAGCCCTCAAACCTTAATAGAAGATATTTTATTTGATGTAGAAGTAGAGGAAACAGGAACTATAGTTAAATTAGACAGTACCTATGCTAAGACTATTTCAAGATATGCAGTATTTCCTTCTAATGGGAAAGTTGAAGTTGTAGAAAAGAAGGATGGATATTTTAAAGTATCTGGATATACTGGGAAAGTAGATTTTAGTGTAAAGGGAAGTAGAATTGATAAAGAACATGAATATTTTAAAATAATGGGAGGAGAAGAACAACATGGCAATTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a70dd0d64b7aa9ba5c84fe7af443eae74e706dc7fd30b253c3d7c5fb20f1d632
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6756
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a new Clostridioides difficile Siphoviride bacteriophage from clinical strains Hinc,K., Iwanicki,A., Obuchowski,M., Martirosjan,G. and Kabala,M. 2021-02-22 — GenBank