Protein

View in Explore
Genbank accession
NP_944293.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALKLSNNAVSKLASSLAADATILAVLPGEGSKYPTLSAGDWFPLTVVKSDGSFEIMRCTARATDTLTVSRAQEGTAALAFNAGDRVELRFTAAVFLALAQIDGALSFSQLTVNSQGNATNPFTVNGASNTNGAGIFLIGNGATTPNKTIRSHNGNLEVVNSSYSAVILSLNDAGDVAVSGSLKRAGNIVWDAGNFDPASKQAAGNYAKSTNNVVTFDWGTHQVGQLGLTIDANYQGYLWHSGNFNPANYAIKSVHQDDGNVNGSVWGGLLSDYLATQLAGKQASGNYMRGVTGNGFTVGWDSGANHLNFFVDGNLVGFVVSDERAKKNITPSSTDALARVKALEFVEFDFIDSPYLPKKHVDNGVIAQQAQRINPNWIDKPPADHPDAYLGLNLQYLLMDAMRAIQQLSSEVDELKAELERNSK
Physico‐chemical
properties
protein length:425 AA
molecular weight: 45172,75910 Da
isoelectric point:5,38671
aromaticity:0,08471
hydropathy:-0,16024

Domains

Domains [InterPro]
DC_1952
STR
1–235
DC_1952 G3DSA:6.20.70.20 DC_0203
IPR030392
CHP
322–420
IPR030392
IPR030392
CHP
322–378
IPR030392 Coil
NP_944293.1
1 425
Architecture
STR
RBD
RBD
STR 1-235 | RBD 250-278 | RBD 310-425
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Bcep22
[NCBI] 		2883944 Uroviricota > Caudoviricetes > Lessievirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_944293.1 [NCBI]
Genbank nucleotide accession
NC_005262.3 [NCBI]
CDS location
range 38664 -> 39941
strand +
CDS
ATGGCACTGAAACTCTCCAACAACGCGGTAAGCAAACTGGCGTCATCATTGGCCGCTGACGCAACGATTCTTGCTGTGCTGCCCGGCGAAGGCAGCAAATACCCGACGCTCAGCGCTGGCGACTGGTTCCCGCTGACTGTTGTGAAAAGCGACGGATCGTTCGAGATCATGCGCTGCACGGCGCGAGCAACGGATACGCTGACCGTCTCGCGTGCTCAGGAAGGCACGGCAGCGCTCGCGTTCAACGCTGGTGATCGCGTGGAACTGCGATTCACCGCCGCAGTATTTCTTGCGCTCGCGCAGATCGATGGCGCTCTGTCGTTTTCGCAGCTCACCGTGAACTCGCAGGGAAACGCTACCAATCCGTTCACTGTTAATGGCGCGAGCAACACGAATGGTGCCGGCATCTTCCTCATCGGTAACGGCGCCACCACGCCCAACAAGACGATTCGCTCGCACAACGGGAATCTTGAAGTTGTCAATAGCTCGTATAGCGCTGTGATTTTGTCGCTCAACGACGCTGGCGACGTAGCTGTCAGCGGTTCGCTGAAGCGCGCTGGCAATATCGTCTGGGATGCCGGCAACTTCGATCCGGCCAGCAAGCAGGCGGCCGGGAATTATGCGAAGTCGACGAACAATGTGGTGACGTTCGATTGGGGCACCCATCAGGTTGGGCAGCTCGGACTGACCATCGACGCGAACTATCAGGGCTATCTCTGGCACTCTGGGAATTTCAACCCGGCAAACTACGCGATCAAGTCAGTCCACCAGGATGACGGCAACGTCAACGGATCGGTATGGGGCGGCCTGCTCTCGGATTACCTCGCCACGCAGCTCGCTGGCAAGCAGGCGTCTGGGAATTACATGCGAGGCGTCACGGGCAACGGGTTCACTGTGGGATGGGATAGTGGCGCAAATCACTTGAACTTCTTCGTCGACGGAAACCTTGTCGGATTCGTTGTTTCTGACGAGCGCGCCAAGAAGAATATTACACCTTCGTCTACCGACGCCCTCGCGCGCGTGAAGGCACTCGAGTTTGTCGAGTTCGACTTTATCGACAGCCCGTATCTGCCGAAGAAGCACGTCGACAATGGTGTGATCGCGCAGCAGGCGCAGCGCATCAACCCCAACTGGATCGACAAGCCGCCAGCCGACCATCCCGACGCGTATCTCGGGTTGAACCTGCAATACCTGCTGATGGACGCGATGCGCGCGATCCAGCAGTTGAGCAGTGAAGTCGACGAGCTCAAGGCCGAGCTCGAGCGCAACAGTAAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3f7fe7057edd9fff5e1eae67448654ff533e4b35eb5a18decc43b9cf3375dc9c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7675
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomes and Characterization of Phages Bcep22 and BcepIL02, Founders of a Novel Phage Type in Burkholderia cenocepacia Gill,J.J., Summer,E.J., Russell,W.K., Cologna,S.M., Carlile,T.M., Fuller,A.C., Kitsopoulos,K., Mebane,L.M., Parkinson,B.N., Sullivan,D., Carmody,L.A., Gonzalez,C.F., Lipuma,J.J. and Young,R. 2011 21804006 GenBank
Complete nucleotide sequence of Bcep22, a bacteriophage isolated from soil samples and specific for Burkholderia cepacia genomovar III Summer,E.J., Cordova,M., Parkinson,B.C., Fuller,A.C., Kitsopoulos,K., Parks,B., Rambo,L., Rothwell,S., Mebane,L.M., Carlile,T.M., No,E.G., Gonzalez,C.M. and Young,R.F. 2022-10-20 — GenBank