Protein

View in Explore
Genbank accession
BHD21357.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MAEIVKPNMNSAWASGGAIIAPSNTKIQQGWTSEIPPHQWQNWWQNRVDMMLLYLSQKGIPEWDSTVEYWANRSFVQRSGNLYKAVRNNINADPLTSSADWTRAIPSATTSVEGTVIRATSAEVIAGTNATKYITPATLESRLSSITVGYLKASNNLSDLQNVTQARQNLGIRAASSSEAGLLRIATANESTARTSDAVALSPAGLNRNIQSSLTDTTARRLLTVGSFGLGASVTTPPNGRSAVNPAGMYYQAATPSFGGGNIFLEVPYSSTVGGFRLSSTYNSNRYFLNGWDSGALNFRPAVEIYHSGNFNPNDKQNALGFVPVNKAGDTMTGNLKAPNFNADSAVNVGNAQASGVFASLEPQGLWIGNSHQRWRWYMEVNSGAYSLGMYTAGGAWINWALQVQQNRRVSFAGRPFAEGRDIAYKDEVNGLGDIGTYAFLGTQAGTLEPGWTVAGTSLTWANASRSATGGFVGYGTWRCCGRAEALGGANDDARASLFLRVS
Physico‐chemical
properties
protein length:503 AA
molecular weight: 53900,22390 Da
isoelectric point:9,20494
aromaticity:0,09940
hydropathy:-0,28012

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Alcaligenes phage SRA-1
[NCBI] 		3459510 Viruses >
Host Alcaligenes faecalis
[NCBI] 		511 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BHD21357.1 [NCBI]
Genbank nucleotide accession
LC889977.1 [NCBI]
CDS location
range 71920 -> 73431
strand +
CDS
ATGGCAGAAATAGTTAAACCGAATATGAATTCGGCATGGGCGAGTGGTGGTGCTATCATCGCCCCTTCTAACACAAAGATTCAGCAAGGGTGGACTTCAGAGATTCCTCCACACCAATGGCAGAACTGGTGGCAGAACAGAGTAGATATGATGCTGTTGTATCTATCTCAGAAAGGTATTCCAGAGTGGGATAGCACAGTAGAGTATTGGGCCAATAGAAGCTTTGTGCAAAGGTCTGGAAACCTGTACAAGGCTGTTAGAAACAACATCAATGCTGACCCACTTACATCTTCAGCGGATTGGACTAGAGCTATTCCTTCAGCAACAACTTCAGTTGAAGGTACAGTAATTCGTGCAACTTCTGCTGAGGTTATTGCAGGAACTAATGCAACAAAGTACATCACCCCAGCTACTTTAGAAAGTAGATTATCATCTATTACGGTTGGATACTTGAAAGCAAGTAATAACCTGAGTGATCTTCAGAACGTAACACAAGCTAGACAGAACTTAGGTATTCGTGCAGCAAGTAGCTCTGAAGCTGGTCTATTGAGAATTGCAACAGCCAATGAATCTACAGCAAGAACATCAGACGCAGTGGCCTTGTCTCCAGCAGGTTTGAATAGAAATATCCAATCTTCATTGACAGACACTACAGCACGTAGATTGCTGACAGTTGGTTCCTTTGGTTTGGGTGCTTCAGTAACCACACCTCCAAATGGTAGATCGGCAGTTAACCCAGCAGGTATGTACTATCAGGCAGCTACCCCATCGTTTGGTGGTGGTAACATCTTCCTAGAGGTTCCATACAGCAGCACAGTTGGTGGATTTAGACTGTCTAGCACATATAATTCAAATAGATATTTCTTGAATGGGTGGGATAGTGGTGCATTGAACTTCAGACCGGCTGTTGAAATTTATCACTCAGGAAACTTCAATCCGAATGATAAACAAAATGCTTTAGGATTTGTACCAGTGAATAAGGCTGGAGATACAATGACGGGCAATTTGAAAGCGCCTAATTTCAATGCTGACAGCGCCGTCAATGTTGGTAATGCTCAAGCTTCAGGTGTCTTCGCTTCTCTTGAGCCACAAGGTCTTTGGATAGGTAATTCCCATCAGCGCTGGAGATGGTACATGGAGGTTAACTCTGGTGCTTATTCTCTGGGTATGTATACGGCAGGTGGTGCATGGATTAATTGGGCTTTACAAGTTCAACAAAACCGTCGTGTTTCTTTTGCAGGCCGACCATTTGCCGAAGGTAGAGATATTGCTTACAAAGATGAGGTTAATGGTTTAGGAGATATTGGAACCTACGCATTTTTAGGTACGCAAGCAGGTACTCTCGAACCCGGTTGGACAGTGGCTGGAACATCTTTGACTTGGGCTAACGCTTCACGTTCTGCTACAGGTGGTTTTGTTGGTTACGGAACATGGAGATGTTGTGGTAGAGCAGAAGCCTTGGGTGGAGCTAACGATGATGCAAGAGCATCTTTGTTTTTACGAGTTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c5b0ef68cd7f9670864dc015f2e34fdfabe286df590de4f109ddf912f3c091b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7764
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent bacteriophage of Alcaligenes faecalis Atyabi,S.R., Bouzari,M. and Soleimani-Delfan,A. 2014-10-09 — GenBank