Protein

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Genbank accession
QQV88680.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,78
Protein sequence
MRGQVMQIPLLFGDGRSHEDFDYTTNMPVNMLPVMRPLKGADGYMRMFPGVKQLAAVDGASRGVDWNTVKQAPYRVLGGRLYLGQTDTGQAIPGVDRTSMSHSRNSVAIVTNGTMIQVYYDGTRKNFSNWPTGGTPPNPTYNWGQIADVTWHRGRYVFSTVDTDTFWVSDLEDEAHPDKISPAYRAESMPDGILAIKTWHDYILTFGSASIEFFGLTGGTDPIYANQPSYTTTVGIVGREAVTAFADTFAFVTSPSSGVVTVGTLNGAGGAWTDIGSNQIKKVLETYSMEELKTVKCESLTFRAHKLLIVHLQRHTLAFDYNASQANGLPVWSIIKTGINVQAAHTGIDFINEGMIVTCGDKTKARLGQLDETTSAQYGEDQEIILFTTFLPLENAIVNDFELDASVGGDSVISRLWISYTEDGALYSPEMMIDYNQPNQWLKRVLLRKIGRIRTALAFKIRGVGATPATLARARVRVS
Physico‐chemical
properties
protein length:479 AA
molecular weight: 52715,07130 Da
isoelectric point:6,01796
aromaticity:0,09812
hydropathy:-0,18079

Domains

Domains [InterPro]
IPR021098
STR
6–478
IPR021098
IPR021098
STR
7–478
IPR021098
QQV88680.1
1 479
Architecture
STR
STR 6-478 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQV88680.1
1 479
Domain Start End Length (AA) Confidence
N-terminal 1 344 344 0,8096
Central domain 345 468 125 0,1491
C-terminal 469 479 10 0,9966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-344
Central
345-468
C-terminal
469-479

Taxonomy

  Name Taxonomy ID Lineage
Phage Kosakonia phage Kc166B
[NCBI] 		2801383 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Kosakonia cowanii
[NCBI] 		208223 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQV88680.1 [NCBI]
Genbank nucleotide accession
MW258711 [NCBI]
CDS location
range 25975 -> 27414
strand -
CDS
ATGCGTGGGCAAGTAATGCAAATCCCGTTACTTTTCGGTGACGGCCGCAGCCATGAAGATTTCGACTACACCACCAACATGCCGGTAAACATGCTGCCGGTAATGCGGCCGTTAAAGGGCGCTGATGGCTATATGCGCATGTTTCCGGGCGTTAAGCAGTTGGCGGCCGTCGATGGTGCCAGCCGTGGCGTTGACTGGAACACGGTTAAGCAGGCACCCTATCGCGTGTTAGGTGGCAGGCTTTACCTGGGGCAGACCGACACCGGACAAGCGATCCCGGGGGTGGATCGAACCAGCATGAGCCACAGCCGCAACAGCGTGGCAATCGTGACCAACGGCACCATGATCCAGGTCTATTACGACGGCACCCGGAAAAACTTTTCCAACTGGCCGACCGGCGGCACACCTCCCAACCCTACCTATAATTGGGGGCAAATTGCGGATGTGACCTGGCACCGTGGCCGCTATGTATTCAGCACCGTGGACACGGACACTTTCTGGGTTTCGGATCTGGAGGACGAGGCGCACCCGGACAAGATCAGCCCCGCCTACCGCGCTGAATCCATGCCTGATGGCATTTTAGCGATCAAAACGTGGCATGATTATATTCTGACGTTTGGCAGCGCCTCGATCGAGTTTTTCGGCCTTACCGGCGGCACTGACCCGATCTACGCCAACCAGCCCAGCTACACCACCACCGTGGGGATCGTCGGCCGCGAGGCTGTTACCGCCTTTGCCGATACGTTCGCCTTTGTGACGTCGCCCAGCAGTGGCGTGGTTACGGTTGGTACTTTGAACGGTGCCGGCGGCGCGTGGACGGATATCGGCAGCAACCAGATCAAGAAGGTGCTGGAAACGTACAGCATGGAAGAACTGAAAACGGTTAAGTGTGAGTCGCTGACGTTCCGAGCGCACAAACTGCTGATCGTTCACCTGCAACGCCATACGCTGGCCTTTGACTACAACGCCAGCCAGGCGAACGGTCTGCCGGTATGGTCGATCATCAAGACCGGGATCAACGTGCAGGCAGCGCACACCGGGATCGACTTTATCAACGAGGGCATGATCGTGACGTGCGGCGACAAGACCAAAGCACGCCTGGGCCAGCTTGATGAGACGACCAGCGCGCAGTATGGCGAGGATCAGGAAATTATCTTGTTTACCACCTTCCTGCCGCTGGAAAACGCCATTGTTAACGATTTTGAGTTAGACGCGAGCGTTGGCGGTGATTCCGTGATCTCCCGCCTCTGGATCAGCTATACCGAGGATGGGGCGCTTTACTCACCGGAAATGATGATCGACTATAACCAACCGAACCAGTGGCTAAAGCGCGTCCTGCTGCGCAAAATTGGCCGTATTCGCACCGCGCTGGCGTTTAAGATTCGCGGCGTTGGCGCAACCCCTGCAACGTTGGCGCGTGCCCGTGTGCGCGTGTCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c4267b103be12d5fe77f166d7192a3626ec2546e46ca9b11ce624f5278afd35
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8134
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Viruses That Lyse Plant and Human Strains of Kosakonia cowanii Petrzik,K., Brazdova,S. and Krawczyk,K. 2021 — GenBank