Protein

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Genbank accession
YP_009814056.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MILEGVYPSFLKGVSQQTPQERNDGQLGAQLNLLSDAVTGLRRRGGVKFQTKLAGIPNSSYIRLIDINGVNYIMIVDTVTGTLKIYNFDGSLLKAHQTDYLKASNGKASIRSTVSRNNCFILNTEQVITKTPTGGTNPTPNPSTMGYISIRSGQFSKMYSVDIKSGSYTVSFSVGTSGSTASQATPEWVATEIENKIKADTTLNARYDVVREGSTVALKAKSDTDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPDILDKYIIAVGTVGNSAYYQYNATTSTWKECGVYEEPYKFTNEPIYWYFDDTDTIQVKSLDIQPRTAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTTVEELQDDDPIEVSSTALSAAQFEYAVPYNKDLVLLAQNQQAVIPANSTVLTPKTAVIYPSSKANISMASEPQVVSRSLYYTYQRGTDYYQVGEMIPNAYSDAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFGSDQKELLVHQYLWAGEDRPLMSFHKWELPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIVDGEGTLPEFLPDGELVAAVYSSETMRHAMVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVAGSDSTVVDLTMTFKGTGEFEYHVSDAYGDVFDGETSAQAWSEAQLGYTRVNTVSDVKFPCGTLLSSTEFSIRTKGTTELNIISASYNIRVPNRGRRRL
Physico‐chemical
properties
protein length:763 AA
molecular weight: 84235,37360 Da
isoelectric point:4,79905
aromaticity:0,10092
hydropathy:-0,25111

Domains

Domains [InterPro]
DC_0058
STR
1–763
DC_0058
IPR058003
TTP
7–761
IPR058003
YP_009814056.1
1 763
Architecture
STR
STR 1-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009814056.1
1 763
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,9812
Central domain 131 339 210 0,1723
C-terminal 340 763 423 0,1776
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-339
C-terminal
340-763

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_B09_Aci08
[NCBI] 		2315601 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii Paris
[NCBI] 		49669 Streptophyta > Magnoliopsida > Liliales > Melanthiaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009814056.1 [NCBI]
Genbank nucleotide accession
NC_048081 [NCBI]
CDS location
range 26391 -> 28682
strand +
CDS
ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAATGACGGGCAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGTGGTGGGGTTAAATTCCAAACCAAGTTAGCAGGTATTCCTAATAGTAGCTATATACGTTTAATTGACATCAACGGTGTTAATTACATCATGATCGTAGACACGGTTACAGGTACTTTGAAGATTTATAATTTTGATGGTTCTCTACTTAAAGCACATCAAACAGATTATCTTAAAGCCTCCAATGGTAAGGCTAGTATCCGCAGTACAGTCTCACGTAATAATTGTTTTATATTAAATACAGAACAAGTTATTACTAAGACACCTACGGGTGGTACTAACCCAACACCTAATCCAAGTACAATGGGTTATATCAGTATTCGTTCTGGTCAGTTCTCTAAGATGTATTCAGTAGACATCAAATCAGGTTCTTATACCGTGAGCTTTAGTGTAGGTACGTCAGGTAGTACAGCCTCGCAAGCTACTCCTGAATGGGTAGCTACTGAGATTGAGAATAAGATTAAAGCAGACACTACTCTTAACGCACGTTATGACGTTGTACGAGAGGGTAGTACAGTTGCACTTAAAGCTAAGTCTGATACAGATACAAACTTGCTAGTGATTGAGTCTGGTACAGGTAGTACTTATATTCAGACGAGTAATTCCAGTCGTGTACAAGGTAAACAGGACATCATTGCTAACCTACCTGACATCTTAGATAAGTATATTATTGCGGTAGGTACAGTAGGTAACTCCGCTTATTATCAATACAACGCTACTACAAGTACTTGGAAAGAATGTGGTGTATATGAAGAACCATATAAGTTCACTAACGAACCTATTTACTGGTACTTTGATGATACTGATACTATCCAAGTTAAAAGCCTAGATATTCAACCACGTACAGCAGGTGATGACGATAATAACCCATTACCTAAGTTTGTGGATTTTGGTATTACAGGTATTAGTGCATACCAATCACGTTTAGTACTGCTTAGTGGTTCATACGTTAATATGAGTGCTACAGCAGACTTTAATGTATATATGCGTACCACTGTAGAGGAATTACAGGATGATGATCCTATTGAGGTGTCTAGTACTGCTTTGAGCGCTGCACAGTTTGAGTATGCTGTTCCGTATAATAAAGATTTAGTTTTATTAGCTCAGAACCAACAAGCTGTTATCCCAGCCAACAGTACTGTACTTACACCTAAGACGGCTGTTATCTATCCAAGTTCAAAAGCTAACATTAGTATGGCTAGTGAACCACAGGTCGTATCACGTAGTTTGTATTATACATATCAACGTGGTACAGATTACTACCAAGTTGGGGAGATGATCCCTAATGCTTACTCAGATGCACAGTACTATGCACAGAACTTAGCAGACCATATCCCGTTATATGCTACAGGTGTTTGTACTTCAATCACAGGTAGTACTACTGATAATATGGCAGTGTTCGGTTCTGACCAAAAAGAGTTGCTTGTACACCAGTACTTATGGGCAGGTGAAGATCGTCCGTTAATGAGCTTCCATAAATGGGAGTTACCTTATGATGTGCTTCACGTACAATTTCTACAAGAGTACTTAGTATTATTTATGGATGTGGGTGATGATTTAGTGGTTGGTACTATTAACGTACAGTTGAACCAACTAGACAATAAACCTATCCCATTCTTAGACATTTACCAATACGTAGATATTGTAGACGGGGAAGGTACATTACCTGAGTTCCTACCAGATGGCGAGTTAGTAGCTGCGGTATACAGTTCTGAGACTATGCGTCATGCTATGGTTCAATATGAAATCGAAGGTACTAAGATTAAGTGTCAATTCAATGGACGTATTTATCTAGGTGTACCTTATGAAAGTTCACTCACATTAACACCTCCTTTTGTTAAAGATGATAAAGGTCGCGTAGTTGCTGGGAGTGATAGTACAGTGGTTGATCTTACAATGACATTCAAAGGTACGGGTGAGTTTGAGTATCATGTTTCTGATGCCTATGGTGATGTGTTTGATGGTGAAACATCCGCACAGGCTTGGTCAGAAGCACAACTAGGGTATACGCGAGTAAATACAGTTAGTGATGTTAAATTCCCGTGTGGTACGTTATTGAGTTCCACTGAGTTTAGTATACGTACTAAAGGTACAACCGAATTAAACATCATTAGTGCTAGTTATAATATCCGTGTACCAAACAGAGGACGGAGACGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c580d948adb6ae14842f720a2710f1f322ede538d7d135443c81bfb33a141dcf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8791
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of five Acinetobacter baumannii phages from Abidjan, Cote d'Ivoire Essoh,C., Vernadet,J.-P., Vergnaud,G., Resch,G. and Pourcel,C. 2019-01-03 — GenBank