Protein

View in Explore
Genbank accession
WHB31178.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MQSTGRPTKFLVPFANNDSAKVELPLTTADATRASLRTGFPPLTGQPPEAGGVPPQLEDMNGGLNQMSRGAWWPMLGGRWPYDATFAADAAINGYPQGALLPSADGLGNWVSTAENNTANPDADSTGWVPGAFYGATALTNQTGGTVTLVPAQAGKRRITVSGTLTSNLVIVVPNWIYSWDFINTTSGAFSMVVRTATGAAAVVEQNGERTPVFCDGTNCTLGSPNIAQATRPTQAIRFDQAVGRLLNVQRFTASGTYTPTPGTARIVVEIVGGGGAGGGAQSNNTAASVGCGGGGGAFVKVMLTSVPSSVTVTIGAGGASANAQGGTGGTTSFGAFASAQGGTGGRSLGADNSIPNFGAEGGPGGDTAAAGGGAILLVASAGASGGAATSLGAGAYLTAGMGGPTYFGGTAKTANTTAGASAKANTGCGGSGTTAASGAVTINQGGAGGSGLCLVWEYA
Physico‐chemical
properties
protein length:460 AA
molecular weight: 44865,12410 Da
isoelectric point:5,56439
aromaticity:0,06739
hydropathy:0,02391

Domains

Domains [InterPro]
DC_1179
STR
1–458
DC_1179
IPR049304
STR
254–456
IPR049304
WHB31178.1
1 460
Architecture
STR
STR 1-458 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage NEB7
[NCBI] 		3038311 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas sp.
[NCBI] 		29446 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WHB31178.1 [NCBI]
Genbank nucleotide accession
OQ676962.1 [NCBI]
CDS location
range 8786 -> 10168
strand +
CDS
ATGCAATCTACCGGCCGGCCAACCAAGTTCCTTGTGCCTTTTGCCAACAACGACTCCGCGAAAGTCGAGCTGCCGCTGACGACGGCCGACGCCACGCGCGCTTCGTTGCGCACGGGTTTTCCACCACTGACTGGCCAGCCGCCCGAGGCCGGCGGCGTGCCTCCGCAGTTAGAAGACATGAACGGCGGACTCAACCAGATGAGCCGGGGCGCTTGGTGGCCGATGCTCGGTGGCCGGTGGCCGTATGACGCGACCTTTGCTGCGGATGCGGCGATCAACGGTTACCCCCAGGGCGCGTTGCTGCCGTCTGCAGATGGCCTGGGCAATTGGGTCAGCACCGCCGAGAACAACACCGCCAACCCTGACGCCGACAGCACCGGCTGGGTACCAGGCGCGTTCTACGGCGCGACCGCGCTGACCAATCAGACCGGCGGCACTGTCACACTTGTGCCGGCGCAAGCCGGCAAACGCCGCATCACGGTGAGCGGCACGCTGACATCCAACTTGGTTATCGTCGTTCCGAATTGGATCTACTCGTGGGATTTCATCAACACGACGAGCGGCGCATTTTCAATGGTAGTGCGTACCGCCACCGGGGCTGCGGCAGTAGTGGAACAAAACGGCGAGCGTACGCCGGTATTTTGTGACGGCACCAATTGCACGTTGGGCAGCCCGAATATCGCCCAAGCCACACGCCCAACCCAAGCGATACGGTTCGATCAAGCTGTGGGCCGTCTGCTCAACGTACAACGCTTTACGGCGAGCGGCACGTACACGCCTACCCCCGGTACCGCTCGCATCGTGGTAGAGATTGTGGGCGGTGGCGGTGCGGGTGGCGGTGCCCAGTCCAACAACACTGCGGCGTCGGTGGGCTGCGGCGGCGGCGGCGGTGCGTTCGTCAAGGTCATGCTTACCTCCGTCCCGAGTTCGGTGACCGTCACGATCGGTGCTGGCGGCGCAAGCGCAAATGCACAAGGTGGGACCGGCGGAACGACGTCGTTCGGCGCGTTTGCCTCGGCGCAGGGGGGAACCGGTGGCCGATCGCTGGGCGCAGACAACAGCATTCCGAACTTCGGCGCCGAAGGCGGGCCGGGCGGCGACACTGCGGCGGCAGGTGGCGGCGCGATCCTGTTGGTGGCCTCCGCAGGCGCTTCGGGCGGTGCCGCAACCTCGCTCGGTGCCGGTGCTTACCTGACTGCAGGGATGGGTGGCCCCACTTATTTCGGCGGCACGGCAAAGACGGCAAACACTACGGCCGGCGCCAGTGCTAAAGCGAACACGGGGTGCGGGGGCTCCGGCACTACGGCGGCATCCGGCGCGGTGACGATCAATCAAGGCGGCGCCGGTGGTTCCGGTTTGTGCTTGGTATGGGAGTACGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
618d610796f26fb27f7fe8f49a0f5ea7f9a4f225d2fb1a49de7011cfe74ce235
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8946
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50