Protein

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Genbank accession
WBC28577.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MADKFTDGGDVPVCSAWLNRVDDLVFDVFSQADTAQEAREAIDAVEEAPEDGITYGRRNRAWIEVASGAGPSGDAILRVPTSANVNSITTNGNPSFVPLAIQLDVSQSADAVTVTKAGSSNPLVRVTQDGDIETDGVIRSGRDVSATGQSFLTSGVDARVGVGRVNNTNSNMLILESDIVDGAGRRLLRYFPAKSDNAESDEPLLEQEYRPQYPGAVLSRGWQLRTKLATFGWAGNLVLGHGPITSESPAILGYWSMRPGEIGLTRALYFLWGSGVPNGGTSTEGYIDGRPPFRIEDNGDCTVGRDMYVQDLIYAGSLVLSDLRLKADIAPLPSALDVIDALNPVSFTWKKDGRPDTGLIAQEVQKVLPDLVKEKGDYLHVDYTKPDLVKEKGDYLHVDYTKLISYLVKAVQELKHGATST
Physico‐chemical
properties
protein length:421 AA
molecular weight: 45435,26390 Da
isoelectric point:4,70044
aromaticity:0,07363
hydropathy:-0,25416

Domains

Domains [InterPro]
DC_0421
STR
7–418
DC_0421
G3DSA:1.20.5.320
STR
20–72
G3DSA:1.20.5.320 IPR036388
IPR030392
CHP
321–421
IPR030392
IPR030392
CHP
321–373
IPR030392
WBC28577.1
1 421
Architecture
STR
STR 7-421
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBC28577.1
1 421
Domain Start End Length (AA) Confidence
N-terminal 1 91 91 0,9633
Central domain 92 290 200 0,1277
C-terminal 291 421 130 0,8884
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-91
Central
92-290
C-terminal
291-421

Taxonomy

  Name Taxonomy ID Lineage
Phage Thiohalocapsa phage LS06-2018-MD04
[NCBI] 		3003842 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBC28577.1 [NCBI]
Genbank nucleotide accession
OP947166.1 [NCBI]
CDS location
range 15079 -> 16344
strand +
CDS
ATGGCCGACAAATTTACCGACGGCGGGGACGTGCCGGTCTGTTCAGCTTGGCTGAATAGAGTAGATGACTTAGTGTTCGACGTGTTCAGCCAGGCTGATACAGCGCAGGAAGCCCGAGAGGCAATTGACGCGGTCGAGGAAGCCCCCGAGGACGGGATTACATACGGACGCCGTAATCGCGCTTGGATTGAGGTCGCCTCCGGTGCCGGGCCGTCGGGGGACGCGATCCTCCGGGTGCCGACCAGCGCCAACGTTAACAGCATCACAACCAATGGCAACCCGTCATTTGTGCCATTGGCGATCCAATTGGACGTGTCCCAATCGGCGGACGCCGTTACTGTGACCAAAGCGGGTTCGAGCAACCCTTTGGTCCGAGTGACCCAAGATGGCGACATCGAAACAGACGGTGTGATTCGATCCGGTCGCGATGTATCGGCGACGGGCCAATCCTTCCTGACATCGGGAGTAGACGCCCGCGTGGGCGTAGGCCGGGTTAACAACACCAACTCAAATATGCTCATACTGGAATCGGATATTGTTGATGGGGCGGGCAGGCGACTGCTACGGTATTTCCCAGCGAAGTCCGATAACGCCGAGAGCGATGAACCACTGTTGGAACAAGAGTATCGCCCGCAGTATCCGGGGGCGGTTTTGTCACGGGGCTGGCAGCTCCGGACCAAACTGGCCACTTTCGGTTGGGCCGGCAATCTGGTCCTCGGCCATGGCCCAATTACCAGCGAATCCCCTGCGATTCTAGGGTATTGGTCAATGCGCCCTGGCGAGATTGGCCTCACCCGCGCCTTGTATTTCCTCTGGGGCTCTGGTGTCCCGAACGGTGGAACAAGCACCGAGGGGTATATCGACGGTCGTCCGCCTTTTAGGATTGAGGACAATGGAGACTGTACCGTGGGTCGCGATATGTATGTTCAGGACTTGATTTATGCCGGGTCTCTGGTCCTTTCCGACCTCAGGCTCAAGGCAGACATCGCCCCGCTGCCCTCGGCGCTCGATGTTATCGACGCCCTGAACCCCGTCTCGTTCACCTGGAAGAAAGACGGCCGGCCGGATACCGGGCTGATCGCCCAAGAGGTGCAGAAGGTCTTGCCGGACTTGGTGAAAGAGAAGGGCGACTATCTGCACGTCGACTACACGAAACCGGACTTGGTGAAAGAGAAGGGCGACTATCTGCACGTCGACTACACGAAACTGATTTCCTATCTTGTCAAAGCCGTACAGGAGCTAAAGCATGGTGCAACTTCAACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f01f8b5f335d112fc7f654a098d91f4906eda8196a1bc371f28dc841d48d55ac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5890
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Horizontal gene transfer and CRISPR targeting drive phage-bacterial host interactions and co-evolution in pink berry marine microbial aggregates Kosmopolous,J.C., Campbell,D.E., Whitaker,R.J. and Wilbanks,E.G. — — GenBank