Protein

View in Explore
Genbank accession
XWX34732.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTLESNIPIALNSQNRHIMSGNMKEAERRLKLAQYELEKHKTEEENAHNSKQITHGKTSTVEKELKTIRNQVKSQVIGKSDNSAAELKDMRVDTQGQLHELAQDRLKADFEFFGGMAKQAETLAKKHEEQIQNSSYYNEIKTYTGRKFNTTYYITHIPHLDSDGNLIKLKRGIEGTNPDKPEHITPVEFSRRHNATFVSNASTGSGSQLKLHGRQIYNGRIIDSLDTDYVKDRWTLAIAEDNTLTSYPPNVNAQTLLSQGVTNALTAFGPIISDNKVIVKDGDYSPNTAVKHPRQVIGQLPNKDLIFFSCDGRENNTKSFIEEGMTLKEVAEVLFDYYGDIKFAYNLDGGGSTSSVLRSTKLNKAQDEDFTADRPVLDFLYVGRDERQIRDLDIQKAYEDIGRVNARVQDIYGKLYKFNRTSSKEFWLTGFDGYSGFITGDDKGNPMLKLYQGTDYWRFWSYELSRTIFRITPDSLQHNNKELARNYSAPESVTDINSVTFGGTYHVPRDAKGSPYSDSSSIVTHYNVSRADFKDVSTAFQTAIPFARSENYKMKRRTYAQGKWSQWFDV
Physico‐chemical
properties
protein length:570 AA
molecular weight: 64894,49040 Da
isoelectric point:7,27320
aromaticity:0,10175
hydropathy:-0,75035

Domains

Domains [InterPro]
DC_1253
STR
1–568
DC_1253
Coil
Unmapped
23–52
Coil PTHR40446 cd19958
IPR018711
STR
211–382
IPR018711
XWX34732.1
1 570
Architecture
STR
STR 1-568 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_67
[NCBI] 		2815633 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX34732.1 [NCBI]
Genbank nucleotide accession
MZ417341.1 [NCBI]
CDS location
range 32867 -> 34579
strand +
CDS
ATGACTTTAGAATCAAATATTCCTATAGCTTTAAATAGCCAGAATAGACATATAATGTCTGGTAATATGAAAGAAGCTGAGAGAAGATTAAAACTAGCTCAATATGAACTAGAAAAGCATAAAACAGAAGAAGAAAATGCTCACAATTCTAAACAAATTACACATGGTAAAACAAGCACAGTTGAAAAAGAATTGAAAACTATAAGAAATCAGGTTAAATCGCAGGTAATAGGCAAGTCAGACAATAGTGCAGCAGAACTTAAAGATATGCGTGTTGACACACAAGGTCAACTACATGAACTTGCACAAGACAGACTAAAAGCTGACTTTGAGTTCTTTGGTGGTATGGCTAAACAAGCTGAAACATTAGCAAAGAAACATGAAGAACAAATTCAAAATAGTTCTTATTATAATGAGATTAAGACTTATACTGGTCGTAAGTTTAATACAACTTACTATATAACTCATATTCCACACTTAGATAGTGATGGCAATTTAATAAAACTTAAACGTGGAATAGAAGGTACTAATCCAGATAAACCAGAACATATTACACCAGTTGAATTCTCAAGAAGACATAATGCTACATTTGTATCTAATGCTAGTACAGGTAGTGGTAGTCAACTGAAACTACATGGTCGCCAAATATATAATGGTCGTATTATAGATAGTCTTGATACTGATTATGTTAAAGACAGATGGACTTTAGCAATTGCAGAAGACAATACTTTAACAAGCTACCCACCTAATGTAAATGCTCAAACTTTATTATCTCAAGGTGTTACTAATGCTTTAACAGCCTTTGGTCCTATCATATCAGATAATAAAGTTATTGTCAAGGATGGAGATTATAGTCCTAACACTGCTGTAAAACATCCAAGACAAGTTATTGGTCAACTACCTAATAAAGATTTAATATTCTTTAGTTGTGATGGTCGTGAGAATAACACAAAATCATTCATTGAAGAAGGAATGACTCTTAAAGAAGTAGCTGAAGTATTATTTGATTATTATGGAGATATTAAGTTTGCATATAATTTAGATGGTGGAGGTTCTACATCTTCTGTGTTACGTTCTACTAAATTAAACAAAGCACAAGATGAAGATTTTACTGCTGATAGACCAGTATTAGACTTCTTGTATGTTGGCAGAGATGAAAGACAAATCAGAGATTTAGATATCCAAAAAGCATATGAAGATATTGGTAGAGTTAACGCAAGAGTGCAAGATATATACGGTAAACTTTATAAGTTCAACAGAACAAGCTCTAAAGAGTTTTGGTTGACTGGTTTTGATGGTTACTCTGGTTTTATTACTGGAGATGACAAAGGAAACCCAATGCTTAAATTGTACCAAGGAACTGATTATTGGAGATTCTGGTCTTACGAATTATCACGTACAATATTCAGAATAACTCCAGATTCATTGCAACATAATAACAAAGAACTTGCTAGAAATTATAGTGCTCCTGAATCTGTAACAGATATTAACAGTGTTACATTTGGTGGAACGTATCATGTACCAAGAGATGCTAAAGGCTCTCCATATTCAGATTCTAGCTCTATTGTTACTCATTATAATGTTAGTAGAGCAGATTTTAAAGATGTTTCAACAGCATTCCAAACTGCCATTCCATTTGCTAGGTCAGAGAACTACAAAATGAAGCGTAGAACTTATGCGCAAGGTAAATGGTCACAGTGGTTTGATGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7df99e283e003f1f03638ba3b5d7c28547638ea4bf982d880bb7fff54a6dd80c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8574
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank