Protein

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Genbank accession
AYJ74678.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLEIFPTYPEIRTEQLSAVEWDKLPNLSTLVISVIRNAPTITPSPGDWLLGVLAGGTEVGKLPIGQADGVPLLNASGALASADAYLSRGSVTSAVDWNTLTNAGTYEIASGAFGTGSANTPPAVTQQGHLLVLKTSGATTQVYVPKSADPGIYWRQYAGGTWSSWATAGVMYGSNSNGSYIRFADGTQICWREATWEMPTGWSTGPSVPWPAAFVATPRVWLNYTRSGWRIILSDITNNSTTIQLSAYNFDTTVTPYRVDILAIGRWK
Physico‐chemical
properties
protein length:269 AA
molecular weight: 28872,09280 Da
isoelectric point:5,40496
aromaticity:0,10781
hydropathy:-0,04907

Domains

Domains [InterPro]
DC_0857
STR
13–269
DC_0857
cd19958
STR
89–166
cd19958
AYJ74678.1
1 269
Architecture
STR
STR 13-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Thermus phage phiKo
[NCBI] 		2301535 Viruses > Varidnaviria > Bamfordvirae > Preplasmiviricota > Prepoliviricotina
Host Thermus thermophilus HB27
[NCBI] 		262724 Bacteria > Deinococcus-Thermus > Deinococci > Thermales > Thermaceae > Thermus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYJ74678.1 [NCBI]
Genbank nucleotide accession
MH673671.2 [NCBI]
CDS location
range 9768 -> 10577
strand +
CDS
ATGAGCCTGGAGATTTTCCCAACTTATCCCGAAATACGCACAGAACAGCTTAGCGCCGTGGAGTGGGATAAACTTCCCAACCTGTCCACGCTCGTAATCAGCGTGATCCGCAACGCCCCTACCATCACGCCTTCCCCCGGAGACTGGCTCCTCGGGGTGCTGGCTGGCGGTACCGAGGTAGGCAAGTTGCCCATCGGCCAAGCCGACGGTGTACCCCTACTCAATGCCAGCGGTGCCCTCGCGAGCGCCGACGCGTACCTGAGCAGGGGGTCTGTGACCAGCGCTGTAGACTGGAACACCCTCACCAATGCGGGTACATATGAGATAGCGAGCGGGGCCTTCGGCACCGGTAGCGCCAACACGCCGCCCGCCGTGACCCAGCAGGGGCACCTGCTGGTTCTCAAAACATCGGGGGCCACCACCCAGGTGTACGTCCCTAAAAGCGCCGACCCTGGCATCTATTGGCGGCAGTACGCCGGGGGCACCTGGTCTTCCTGGGCCACGGCCGGTGTGATGTATGGGTCCAACTCTAACGGCTCCTACATTCGGTTTGCGGATGGAACGCAGATATGCTGGCGTGAAGCAACTTGGGAAATGCCAACGGGATGGAGTACAGGTCCCTCTGTCCCTTGGCCTGCGGCGTTTGTGGCCACACCCAGGGTGTGGCTTAACTATACTAGATCGGGGTGGCGCATCATCCTCAGCGATATTACCAACAATAGTACTACCATCCAATTGTCCGCCTACAACTTTGACACCACAGTAACGCCGTACAGGGTGGACATACTAGCCATCGGGAGGTGGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf6e85459e223ba87117355fcd79a098e43af63ce676acf616d09c307007f807
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7937
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural diversity of CRISPR spacers of Thermus bacteria, its variation between distant hot springs, and its role in a record of history of phage-bacteria interactions Lopatina,A. 2019-03-25 — GenBank