Protein

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Genbank accession
YP_009802348.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALAPKTVYTYPLDGSNRTFAINFEYLTRKFVQITLIGQDRKLLVLNQDYRFVTRTSIQTTIAWGPAQGYETIEIRRFTSATDRLVDFSDGSILRAYDLNISSVQALHIAEEARDLSADTIAVNNDGDLDARGRRIVNLADATDPSHAVTLRQEQEWAASTLSNRNAAESSANASAQSASGSSAARDRAIQAENKAKEWAVAPTEIDGDQYSSRSWALASGRFADDAKASAKVATDEIAKIDGQVDLAKGHADRSKTEADRSTERAASSAASANSANNSAISASGDATRAKNSAKDASEAGLQMGMSMWGYRPQPFNGFVVDDGQELDQATYPAFVQALRDGLFPTTDEATWQANPWARGYFVLNSSPGKFRMRDLNGAQPGSYGGVFQRGDNGNVTQPGNRQWRPHIFRDQIQDHRHPQSERYYGDGADGKNGGVETTVSSGTGQVHGNQAIQTYDIVKTTGMPVDAKFKDGARNPYNELNPVRHGAETYPVHVTGAWMTRLFGLITPLGSAEANSLATAYGALSSRTSALEGRMRTLGDGQTWKDMTSQRTWNTVYTNDTGRSIQVIVRLNQQSTSLSYFYVNDFLIGYFGQANIEGGGQCSAIVPPGSVYRLIDGRGRNTLNGWYELRT
Physico‐chemical
properties
protein length:632 AA
molecular weight: 68841,88490 Da
isoelectric point:6,06201
aromaticity:0,08703
hydropathy:-0,56582

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604
DC_0474
STR
1–616
DC_0474
YP_009802348.1
1 632
Architecture
ATT
STR
ATT 1-131 | STR 132-616 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PspYZU08
[NCBI] 		1983557 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Pijolavirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009802348.1 [NCBI]
Genbank nucleotide accession
NC_047981.1 [NCBI]
CDS location
range 34650 -> 36548
strand +
CDS
ATGGCTTTAGCACCAAAGACGGTTTATACCTACCCGCTTGACGGCTCCAATCGGACGTTCGCCATCAACTTTGAGTACCTCACTCGGAAGTTCGTGCAGATCACCCTGATTGGTCAAGACCGTAAGCTGCTGGTACTGAACCAAGACTACCGTTTCGTTACCAGAACCTCGATCCAAACGACTATCGCTTGGGGTCCTGCTCAGGGTTATGAGACCATCGAGATCCGTCGCTTCACCTCGGCAACTGATCGACTGGTTGACTTCTCGGACGGCTCGATCCTTCGGGCATACGACCTGAACATCTCAAGTGTCCAAGCGCTGCACATTGCGGAAGAAGCACGGGACCTCTCTGCGGACACCATTGCGGTGAACAACGATGGTGACTTGGATGCTCGTGGTCGCCGTATCGTGAACCTTGCAGATGCCACTGATCCAAGCCATGCGGTAACTCTGCGGCAGGAACAGGAATGGGCTGCATCGACTCTGAGCAACCGTAATGCTGCTGAGTCTTCCGCCAATGCTTCCGCTCAGAGCGCCTCTGGGTCTTCTGCTGCACGGGACCGCGCCATCCAAGCTGAGAACAAAGCGAAGGAATGGGCAGTTGCTCCTACAGAGATCGACGGGGATCAATATTCCTCCCGCTCGTGGGCTCTGGCATCTGGTCGATTTGCTGATGACGCTAAGGCTTCCGCTAAGGTTGCAACTGACGAGATCGCTAAGATCGACGGGCAGGTTGACTTAGCGAAAGGCCATGCAGATCGCTCTAAGACAGAGGCTGATCGTTCTACTGAGCGAGCCGCTTCTTCTGCTGCAAGTGCGAATAGTGCGAACAACAGTGCGATTAGTGCAAGTGGTGATGCAACACGAGCGAAGAACTCAGCTAAGGACGCCTCGGAGGCTGGTCTACAGATGGGCATGAGCATGTGGGGCTATCGTCCACAACCTTTCAATGGGTTCGTTGTGGACGATGGACAGGAATTAGATCAGGCAACTTATCCTGCCTTTGTGCAGGCACTGCGAGATGGACTGTTCCCGACTACCGATGAAGCAACGTGGCAGGCTAACCCGTGGGCTCGTGGCTACTTTGTGCTTAACTCCAGTCCCGGCAAGTTCCGTATGCGTGACCTCAACGGTGCTCAACCGGGATCGTATGGCGGAGTGTTCCAACGAGGTGATAATGGCAATGTAACTCAACCGGGCAACCGTCAATGGCGGCCACACATCTTCCGGGATCAGATTCAAGATCACCGTCACCCTCAATCTGAGCGGTACTACGGGGATGGTGCTGATGGTAAGAATGGCGGCGTAGAGACGACAGTATCCAGCGGAACGGGTCAAGTCCACGGGAACCAAGCAATCCAGACTTATGACATTGTGAAGACTACAGGTATGCCTGTTGACGCGAAGTTCAAGGATGGTGCAAGAAACCCGTACAATGAACTTAACCCGGTCCGTCACGGTGCTGAGACTTATCCTGTACACGTAACTGGTGCATGGATGACGCGTCTGTTCGGGTTGATAACTCCACTCGGCTCCGCTGAGGCAAATAGCTTGGCTACCGCGTATGGAGCCCTATCTTCTCGTACCAGCGCCCTTGAGGGGCGTATGAGAACACTGGGTGATGGTCAGACATGGAAGGACATGACATCGCAGCGTACATGGAACACTGTCTACACGAACGACACCGGACGCTCCATTCAGGTAATCGTTCGTCTCAACCAGCAAAGTACGAGCCTTTCATATTTCTATGTTAATGACTTCCTGATTGGTTACTTCGGGCAGGCCAACATCGAAGGTGGCGGGCAGTGCTCCGCAATCGTTCCACCGGGTTCTGTCTATCGACTGATCGACGGACGTGGACGGAATACACTCAACGGCTGGTACGAGCTGCGCACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c837722453b298300d8cdd35cf2bac6800aceff32bd000401c108f2e43f91fd0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7082
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of lytic bacteriophages infecting Pseudomonas strains for biocontrol of fish and shrimp spoilage during chilled storage Yang,Z., Tao,X., Gao,L. and Rao,S. 2022 — GenBank