Protein

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Genbank accession
QBX27133.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSINSTNLKQFEGGAIVKQGDSASLFGYELLDENMHPISDLNGKNATIRIFNQKGKATFESKVDKSRVTLKIEKALPIGSYLVEVVCGGYIFPSDRSTRLDVTRSADEFTSEEVLSLVKNDVKTEIDKYIAEHPNGSQTEELPDLTVLYNLAKI
Physico‐chemical
properties
protein length:154 AA
molecular weight: 17060,07420 Da
isoelectric point:5,09678
aromaticity:0,07143
hydropathy:-0,33831

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan370
[NCBI] 		2548131 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus parasanguinis
[NCBI] 		1318 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27133.1 [NCBI]
Genbank nucleotide accession
MK448919.1 [NCBI]
CDS location
range 36487 -> 36951
strand +
CDS
ATGAGTATTAATTCAACAAATCTAAAGCAATTTGAAGGTGGTGCAATCGTAAAGCAAGGCGACTCTGCCTCTCTTTTTGGTTATGAGTTGTTGGATGAAAATATGCATCCAATCAGTGATTTAAATGGAAAAAATGCCACAATTAGGATTTTTAACCAAAAAGGAAAGGCTACATTTGAAAGTAAAGTGGATAAATCCAGAGTCACTTTAAAAATCGAAAAAGCCCTTCCGATCGGATCCTATCTGGTTGAAGTCGTTTGCGGTGGCTATATCTTCCCAAGTGATCGCTCAACACGTTTAGACGTCACCCGTTCAGCAGATGAATTTACAAGCGAGGAAGTATTATCGCTTGTAAAAAATGATGTTAAAACTGAAATTGACAAGTATATCGCTGAACATCCAAACGGATCACAAACGGAAGAGTTGCCAGACCTAACAGTACTATACAATCTTGCAAAAATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
39cd9c3b75fbe5c8c4b9e1897595ec2275b5b882d6696dd08fe2667da92875ea
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8181
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank