Protein

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Genbank accession
XQO94824.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDLYIKRLREAEDKVNGRGTIGSLSIEDEKFCVTLEDKFIPLYEKVKGETRIPAGRYPVKKREVLTPLTKAYRNKNSLRGVFDWHLEICDVPFFENVYIHIGNYPKDTDGCILVGKSAVPGQAMITHSTEVYIKLYTLVSAAMKRNEEVWINIS
Physico‐chemical
properties
protein length:154 AA
molecular weight: 17657,22030 Da
isoelectric point:8,36105
aromaticity:0,09740
hydropathy:-0,30519

Domains

Domains [InterPro]
IPR043732
STR
18–139
IPR043732
XQO94824.1
1 154
Architecture
STR
STR 18-139 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPALA
[NCBI] 		3400948 Viruses > unclassified bacterial viruses >
Host Vibrio anguillarum ALA
[NCBI] 		1416571 Arthropoda > Malacostraca > Decapoda > Mithracidae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQO94824.1 [NCBI]
Genbank nucleotide accession
PV171464.1 [NCBI]
CDS location
range 107831 -> 108295
strand -
CDS
ATGGATTTATATATTAAAAGGCTGCGTGAAGCAGAAGACAAAGTTAATGGGAGAGGTACAATAGGTTCTCTTTCTATTGAAGATGAGAAGTTTTGTGTGACGTTGGAAGACAAGTTCATTCCCCTTTATGAAAAAGTTAAGGGTGAAACTAGGATTCCAGCCGGACGTTATCCTGTCAAGAAGCGTGAAGTGTTGACGCCTCTCACAAAGGCTTACAGGAACAAGAACTCGCTCAGGGGTGTATTCGACTGGCACCTTGAAATATGTGACGTACCTTTCTTTGAGAACGTCTACATCCATATCGGTAATTACCCGAAGGATACGGATGGTTGCATATTGGTTGGTAAATCAGCTGTACCTGGTCAAGCCATGATCACACACTCCACGGAGGTGTATATTAAACTGTACACCCTAGTGAGCGCCGCTATGAAGAGAAATGAAGAAGTGTGGATCAATATTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
53b173af13839dd0f0972f062202bfe827ab53a5718aa140c4fe2b5efdde3671
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9695
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Vibrio anguillarum phage VPALA Altinok,I., Ture,M., Cebeci,A., Ozturk,R.C. and Ustaoglu,D. 2015-10 — GenBank