Protein

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Genbank accession
QGZ17934.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAIIKVKNPAIDLDAAEIPNLDTSKITSGTLADARFPATLPAASAANLTNIPAANITGTLPAISGANLTGLTSSLSSLTDTTVSASDPTTTSNKTPVGHLWINSTSGETYVLTDATTNQNDWQNIGEGSGSIKYFPGLTSLVMIGGGGGGASDMAGSGGAGGLLHFTGYRGTIQYGVQYTITVGDGGAAQSGQSGDGNNGNNTTAFGETAGGGFGGSANGGSGGGGNSGGGDSGSASTSTSASLYTSFNGYSNDGGSNLGNPGAGGAGAGGNGLGGNNNQSGNGPGGAAGPGIQLTNVYNGSDTYYWAGGGGGAGYGDTENGAAGGIGGGGGGGTFRTTGGGSGGAGGGSALNNGTAGNGNNDATNGGDAGANTGSGGGGSSHQGGGQTSARGGDGGSGIVMIKTPDSYTTATTTGSPVFTNTGGYKYYAFTSSGSIIFNQ
Physico‐chemical
properties
protein length:441 AA
molecular weight: 41443,32650 Da
isoelectric point:4,28904
aromaticity:0,06349
hydropathy:-0,32902

Domains

Domains [InterPro]
DC_0946
STR
49–166
DC_0946
QGZ17934.1
1 441
Architecture
STR
STR 49-166 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC103P
[NCBI] 		2686458 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17934.1 [NCBI]
Genbank nucleotide accession
MN698242 [NCBI]
CDS location
range 34635 -> 35960
strand -
CDS
ATGGCAATAATAAAAGTTAAAAACCCAGCAATAGATTTAGATGCAGCAGAAATTCCTAATCTTGATACAAGTAAAATTACAAGTGGAACTTTAGCAGATGCTAGATTTCCTGCTACTTTACCAGCAGCTAGTGCAGCTAATTTAACAAATATTCCTGCTGCTAATATTACTGGTACTCTTCCAGCTATTAGTGGAGCAAACTTAACAGGATTAACATCTTCTTTATCTTCTTTAACAGATACAACTGTTTCAGCTTCTGACCCAACAACTACATCTAATAAAACTCCAGTTGGACATCTTTGGATAAATAGTACATCTGGTGAAACTTATGTTTTAACTGACGCAACTACAAACCAAAATGATTGGCAAAATATTGGTGAAGGTTCTGGAAGTATAAAATACTTTCCAGGTCTTACATCATTAGTAATGATTGGTGGTGGCGGAGGTGGTGCTTCTGATATGGCAGGTAGTGGTGGAGCAGGTGGACTTCTTCATTTTACAGGTTACAGAGGTACAATTCAATATGGTGTACAGTACACTATTACAGTAGGTGATGGTGGTGCAGCACAATCTGGTCAATCTGGTGATGGAAATAATGGTAATAACACAACAGCTTTTGGTGAAACTGCAGGTGGTGGTTTTGGAGGTTCAGCAAATGGAGGTTCTGGAGGTGGTGGAAACTCTGGTGGTGGTGATAGTGGTTCAGCTAGTACATCAACAAGTGCTTCTTTGTATACTTCTTTTAATGGTTACTCAAATGATGGTGGTTCTAATTTAGGAAATCCAGGTGCAGGTGGTGCAGGTGCAGGTGGTAATGGTTTAGGTGGTAATAATAACCAATCAGGAAATGGTCCAGGTGGAGCTGCAGGTCCAGGGATTCAACTTACAAATGTTTATAATGGTTCAGATACCTACTACTGGGCAGGTGGTGGTGGTGGAGCAGGTTATGGAGATACCGAAAATGGTGCTGCTGGAGGAATCGGTGGCGGCGGCGGAGGTGGAACATTCCGAACAACTGGAGGTGGCTCTGGTGGTGCAGGAGGTGGCTCTGCTTTAAATAATGGTACTGCAGGAAATGGTAACAATGATGCTACAAATGGTGGTGACGCAGGTGCAAACACAGGTTCTGGCGGAGGAGGTTCTTCTCACCAAGGTGGAGGACAAACTTCAGCAAGAGGTGGTGATGGTGGTTCTGGAATAGTTATGATTAAAACACCAGATTCATACACAACTGCAACAACTACAGGAAGTCCAGTTTTTACAAATACAGGAGGATATAAATATTATGCATTTACAAGTTCTGGAAGTATAATATTTAATCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
32697c33a63ab742c68cbd7faa317bf5ac1a4ac1361bd976c2408ccac80a7568
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7076
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank