Protein

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Genbank accession
QGT52253.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MTVNTTSIVSGPYAGNGVADTFSYTFKIEDKSQLAVYETDDAGVETLLTVDVDYTVAGIGNDAGGTVARVAGALPNNYEWLIRSDYKYTQLTAFESQGAFFPDLHENAFDKLTFLNQQILDKLGRGPVVSDTYTGTLPLSLPNPVSERFLRWKSDLTGFDNFDIASIGALAVSDFAKTYLDELNATDTRAVLDCPSNADLTTVDSKVDAVDNRVDDILASSFKNALINSRFRVNQRGVSGTVVLAAGEYGHDRFRGGSSGCTYTFSSSGGVTTIDISAGTIEQEILASNTEAGSNVLSWSGTAQGRIDGGSYGDSGNVTATLDGTSNVTCEWNTGTLSLCQLEKAPTATSCEFKSLQQDEFECHYYFWVPDGSVSYNVPARKVNAAGTGAVTSSTFSTGFIIPKMRVVPTITNVTAGNIALRSESGGLIAVCTAVPVVSQIALNMFNCTFVSADVTDVTHIRFATDMPHFDAEL
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50538,41240 Da
isoelectric point:4,44006
aromaticity:0,09283
hydropathy:-0,05570

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGT52253.1
1 474
Domain Start End Length (AA) Confidence
N-terminal 1 353 353 0,6554
Central domain 354 463 111 0,0008
C-terminal 464 474 10 0,9987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-353
Central
354-463
C-terminal
464-474

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage MZH0603
[NCBI] 		2664193 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio variabilis
[NCBI] 		990271 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGT52253.1 [NCBI]
Genbank nucleotide accession
MN592897.1 [NCBI]
CDS location
range 18300 -> 19724
strand -
CDS
ATGACAGTCAACACAACATCGATCGTATCGGGACCTTACGCAGGTAATGGTGTAGCAGATACGTTCAGTTACACATTCAAAATTGAAGATAAGTCACAGTTAGCTGTGTATGAAACTGATGACGCAGGGGTTGAAACCTTATTGACGGTTGATGTCGATTACACCGTTGCTGGTATAGGTAATGACGCTGGTGGTACAGTAGCACGTGTCGCGGGTGCGCTACCTAATAACTATGAATGGCTTATACGATCTGATTACAAGTACACACAGTTGACCGCTTTCGAATCGCAAGGTGCGTTCTTTCCTGATTTACACGAGAACGCTTTTGACAAGTTGACATTCTTGAATCAACAGATACTAGATAAACTGGGTCGCGGTCCCGTTGTTTCTGATACTTACACAGGTACATTACCGCTGAGTTTACCAAATCCAGTTTCTGAAAGGTTTTTACGATGGAAGTCTGATTTAACTGGTTTTGATAATTTCGACATCGCGTCGATAGGTGCATTGGCGGTGTCTGACTTCGCTAAGACTTATCTAGATGAGCTTAATGCTACAGACACTAGAGCTGTTTTAGACTGTCCATCAAACGCAGACCTGACCACCGTAGATAGTAAGGTTGATGCTGTAGATAATAGAGTGGATGATATACTCGCTTCTAGTTTTAAGAATGCCTTAATAAACTCTCGTTTCCGTGTTAATCAAAGAGGTGTCAGCGGTACTGTAGTTCTGGCGGCGGGTGAATATGGTCATGACAGGTTTAGAGGTGGGTCCAGCGGTTGCACTTACACTTTCTCATCATCAGGCGGTGTAACTACTATTGATATATCAGCAGGTACTATAGAGCAGGAAATATTAGCCAGCAACACCGAAGCAGGTTCTAATGTGTTAAGCTGGTCTGGTACTGCACAGGGTAGAATAGATGGTGGTAGTTACGGTGATTCAGGGAATGTGACAGCTACTCTTGATGGTACATCTAATGTTACATGTGAATGGAATACAGGCACCTTATCTCTGTGTCAATTAGAAAAGGCACCGACTGCTACTAGCTGTGAATTCAAATCACTCCAGCAAGATGAGTTTGAATGTCATTATTACTTTTGGGTTCCTGATGGTTCAGTTTCGTATAATGTACCTGCTAGAAAGGTTAATGCAGCAGGTACTGGGGCTGTAACATCCTCTACATTTTCTACTGGATTTATCATACCAAAGATGAGAGTGGTACCAACAATCACAAATGTAACAGCAGGCAATATAGCTTTACGTTCTGAATCAGGTGGGCTTATTGCGGTATGTACAGCAGTTCCAGTAGTAAGTCAAATAGCGTTGAACATGTTCAATTGTACCTTCGTTTCTGCCGATGTTACAGATGTTACTCATATAAGGTTTGCTACTGATATGCCACACTTTGACGCGGAGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
02b7fd969b3adaa48453533a3da9cb50010d40bb55b88c8b310ec52bc70c2aeb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8563
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Vibrio Phage MZH0603 from the Yellow Sea Xue,C. 2016-02-08 — GenBank