Protein

View in Explore
Genbank accession
QCW23753.1 [GenBank]
Protein name
tape measure protein
RBP type
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MTDKLIRELIVDVKQKGATKTAKSIQSVATGLEDAAAAAELTVEQLNKIPNSLNIIEKAASRASASLQKVGPNKGMTQMQKTLSNIEEYMDLLVSSVTHMTESMNRGFKQSAASAERMGNEIAAAVEKSEDQLIGLNGTLKKNSQGFDGMGNAAGKASRALGNTSGSARGATRDFSAMAKIGGSLPIMYAAIASNVFVLASAFDQLKTGDQLNRLMQFGEIIGAQTGTPVQNLAAGLQQATGYAISFEEAMKQASVASAYGFSTKQLEEFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYAAYVKQLNAANTGIQYNMNSLTSYQKQQAYANAVVAESTRRFGNLDAVLRATPWEQFAANADSALRKLQQSAATYLQPVIASLNAFMTQTRAAAQATEAISQAASNAQIDPKNTDAVIAGLVNSKQGLEDANKTYEEALKKRNDLRAEYDKRLVNAPWALKAAVNAGNEGLPTMVSDPANKAWVNQTVDIGNQIKMMNREVEDSQSNINAWKNTWAAATDTLKKASPELQKSLKAFDTGGVPGAMGGIQVDPNVLAGVSQISKEFKNLQTTSKDTATSIKAIGTDTNSAKLSAGALAESIKTVEAYSKSTGQNADTLVKKLNLGFDSMDEMKKTQQAIDKYNKASITDKSMELAIEQARNKALAAGKDNNVADAEANKVKTGYLERQIAATKALLENQKDNQSLVKELNELETERLQTINATYKGATKIKDVSDKIVGIEEQIKLLSDSSLNSQQYTIATMQLQLKIEQDRQKILAGNAQKQKDYMQSKLEEARLQRQIREEMYSQENEALARQRDQTTALREAGMELGTQEQILANIRDKEKEIADLRKAAKDNNVAADTQTIAQLNDQIAVLKKQADTAKVTQDRGYQNSTTGLLGGSYASTQGMSPEQKTAQEFQNNQDGYAQAISNLQAINSEATNAGQSIGNLVNAMMQYSQGSLDFSSVAAAGMQTIGQFISMGANQHIGAIDAAIAAEQKRDGQSEESKNKIKKLEAEKVKIQQQSAKQQILISTATAIMQAATSVPYPYSIPLMIAAAAAGAMSYSQASNPTSASLSGLDSGSNTVASLSLGERDKKVDISQQANSGELSYMRGDSGTGNANTFIPRAEGGNMVPGVSYAVGENGIEVVTPQVPSTVTPADHIGSGGSSSGAPTIHLNVSAMDAKSFVAFANENAGVFYSAVENTLNENGSTLKRLNR
Physico‐chemical
properties
protein length:1233 AA
molecular weight: 131641,17590 Da
isoelectric point:6,06599
aromaticity:0,04542
hydropathy:-0,40973

Domains

Domains [InterPro]
IPR056207
TAS
1–82
IPR056207 DC_0073 IPR056208
Coil
Unmapped
438–465
Coil Coil Coil Coil Coil Coil
QCW23753.1
1 1233
Architecture
TAS
STR
TAS
TAS 1-81 | STR 82-1196 | TAS 1197-1232 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagS_AAS21
[NCBI] 		2575261 Uroviricota > Caudoviricetes > Demerecviridae > Keyvirus AAS21 >
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW23753.1 [NCBI]
Genbank nucleotide accession
MK770119 [NCBI]
CDS location
range 11199 -> 14900
strand +
CDS
ATGACTGATAAGTTAATACGCGAACTGATAGTTGACGTAAAGCAGAAAGGTGCTACAAAAACAGCAAAGTCTATTCAATCGGTAGCGACTGGATTAGAGGATGCGGCAGCCGCTGCTGAGTTAACTGTTGAACAGCTTAATAAAATCCCTAATAGTCTAAATATTATTGAGAAAGCTGCAAGTAGAGCATCTGCTTCATTACAGAAAGTAGGCCCTAATAAGGGTATGACTCAAATGCAGAAGACTCTAAGTAATATCGAAGAGTATATGGATTTGTTAGTATCATCGGTTACTCACATGACAGAGTCGATGAACAGAGGATTTAAACAATCCGCTGCCTCTGCCGAAAGAATGGGTAACGAAATCGCTGCTGCGGTAGAGAAGTCAGAGGATCAGCTTATTGGTCTTAATGGTACTCTAAAGAAAAACAGCCAAGGCTTTGACGGTATGGGTAATGCTGCTGGAAAGGCTTCGAGAGCGCTGGGTAATACTTCTGGTTCTGCTAGGGGTGCGACTCGTGACTTCTCAGCTATGGCTAAAATTGGTGGTTCTCTGCCAATTATGTATGCTGCAATTGCATCTAACGTCTTCGTTCTAGCTTCTGCGTTTGATCAATTAAAGACTGGTGACCAGTTAAACAGACTTATGCAGTTTGGTGAAATTATAGGTGCTCAGACTGGTACTCCAGTTCAGAACCTTGCAGCCGGACTTCAGCAAGCAACTGGTTATGCTATCTCTTTCGAAGAAGCAATGAAACAGGCATCTGTAGCGTCTGCTTATGGATTTAGTACTAAACAGTTAGAAGAATTTGGTCTAGTAGCTCGTCGTGCTGCGGCAGTACTAGGTGTAGATATGACTGATGCACTTAACCGTGTTATTAAGGGTGTATCTAAACAAGAAATTGAATTACTGGATGAATTGGGTGTAACTATTCGTCTAAACGATGCTTATGCTGCGTATGTTAAACAGTTAAATGCTGCAAACACCGGTATTCAGTATAACATGAACTCTCTAACAAGTTATCAGAAACAGCAGGCATACGCTAATGCTGTAGTAGCTGAGTCTACTAGACGTTTTGGTAACTTAGACGCAGTACTACGTGCTACACCATGGGAACAGTTTGCAGCTAACGCAGACAGTGCATTAAGAAAATTACAGCAATCAGCAGCTACGTACTTACAGCCTGTTATTGCTTCTCTTAACGCCTTTATGACTCAGACGCGCGCAGCTGCTCAAGCAACAGAAGCTATCTCTCAGGCAGCCTCTAATGCTCAAATTGACCCTAAAAATACTGATGCGGTTATTGCTGGGCTTGTTAACTCTAAACAAGGGTTAGAAGACGCCAACAAAACTTACGAAGAAGCCTTGAAAAAGCGTAATGACTTACGTGCAGAATACGATAAGCGTCTTGTAAATGCTCCGTGGGCGCTGAAAGCCGCTGTCAATGCTGGTAACGAAGGTCTTCCTACCATGGTTTCTGATCCTGCTAACAAGGCATGGGTCAACCAAACTGTGGATATAGGCAACCAGATTAAGATGATGAATCGAGAAGTAGAAGATTCACAGTCTAACATCAATGCTTGGAAAAATACGTGGGCTGCTGCAACAGATACGCTGAAGAAAGCTAGTCCTGAACTCCAGAAAAGCTTAAAAGCATTTGATACAGGTGGTGTTCCAGGAGCAATGGGCGGTATTCAGGTAGATCCTAACGTACTGGCAGGGGTATCTCAGATAAGTAAAGAGTTTAAAAACCTCCAAACTACGTCTAAAGATACTGCAACTTCTATTAAAGCCATAGGTACAGACACAAACTCTGCTAAATTATCTGCAGGTGCTCTAGCTGAGTCTATTAAAACAGTAGAGGCTTACTCTAAATCTACTGGACAAAACGCAGACACCCTAGTTAAGAAACTAAATCTTGGTTTTGATAGTATGGATGAGATGAAAAAGACTCAACAGGCTATCGACAAGTATAACAAAGCTTCTATAACTGATAAATCTATGGAACTTGCTATTGAACAGGCTCGTAATAAAGCACTGGCAGCAGGTAAAGACAATAATGTTGCGGATGCAGAAGCTAACAAGGTTAAAACTGGATATCTGGAAAGACAGATTGCTGCTACAAAAGCTTTACTAGAAAATCAGAAGGATAATCAGTCACTTGTTAAAGAATTAAACGAACTTGAGACTGAAAGACTACAGACAATCAATGCTACCTATAAGGGAGCTACCAAAATCAAGGATGTATCTGATAAGATTGTAGGTATCGAAGAGCAAATCAAGCTTTTATCTGACTCTAGTTTAAATAGTCAGCAGTACACTATTGCTACTATGCAGTTACAGCTAAAAATTGAACAGGATCGTCAGAAAATCTTAGCAGGTAACGCTCAGAAACAGAAAGATTACATGCAGTCTAAGCTTGAAGAGGCCAGACTACAGCGTCAGATTCGTGAAGAGATGTATTCTCAGGAAAATGAAGCTCTAGCAAGACAGCGTGATCAGACCACAGCACTACGTGAAGCCGGTATGGAACTAGGCACTCAGGAACAGATTCTAGCTAACATCAGGGATAAGGAAAAGGAAATAGCTGATCTACGTAAAGCTGCTAAAGACAATAATGTTGCTGCGGATACCCAGACCATAGCTCAACTTAACGATCAGATTGCTGTACTTAAAAAGCAAGCTGATACTGCTAAAGTTACTCAGGATAGGGGTTATCAGAACTCTACAACTGGACTATTAGGCGGTAGTTACGCTTCAACACAAGGAATGTCTCCAGAACAGAAGACTGCACAGGAATTCCAGAATAACCAGGATGGTTATGCACAAGCTATCTCTAATTTACAGGCTATTAACTCAGAAGCTACTAATGCTGGTCAAAGTATTGGTAACCTAGTTAATGCTATGATGCAGTATTCACAGGGGTCTTTGGACTTCAGTAGTGTAGCTGCAGCAGGTATGCAAACAATTGGTCAGTTTATATCTATGGGTGCTAACCAGCATATCGGAGCTATAGACGCAGCAATTGCAGCAGAACAGAAAAGAGATGGACAGTCAGAAGAGTCTAAGAACAAGATTAAGAAGTTAGAAGCTGAGAAAGTAAAAATTCAACAGCAATCTGCGAAACAACAGATTCTGATTAGTACTGCAACTGCAATCATGCAAGCAGCTACTTCAGTTCCTTATCCTTATTCTATTCCTCTTATGATTGCGGCAGCAGCGGCAGGTGCAATGTCTTATTCACAGGCGTCTAACCCTACATCTGCATCACTTTCTGGACTAGATAGTGGCTCTAATACAGTTGCTAGCTTAAGTCTAGGAGAACGTGATAAGAAGGTCGATATTTCACAGCAAGCCAACTCAGGTGAGTTATCTTACATGAGAGGTGATAGCGGTACTGGTAATGCCAATACGTTTATCCCACGTGCTGAAGGTGGTAATATGGTTCCTGGAGTTAGTTATGCTGTAGGTGAGAATGGTATAGAAGTTGTTACCCCACAGGTTCCTTCTACTGTAACACCAGCAGATCATATAGGTTCAGGTGGTAGTTCTAGCGGTGCTCCAACTATTCACTTAAACGTTTCTGCAATGGATGCTAAGAGCTTTGTTGCCTTTGCAAATGAAAATGCGGGAGTGTTCTATAGTGCTGTTGAGAATACTCTTAATGAAAATGGAAGTACATTAAAACGTCTGAACAGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
354d70d4ac1cb1715f3fc2f66fb1baa63dadee8a8177197d8f96d76a01155e7a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4229
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea bacteriophage vB_PagS_AAS21 Truncaite,L., Simoliuniene,M., Zajanckauskaite,A., Meskys,R. and Simoliunas,E. 2012-05 — GenBank