Protein

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Genbank accession
XFC47957.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTPTSLPIPSEDPRDLKFNAGKFDEVMTSDAHYYVDRFGVKRWTIAGFQYTAEEAIRAYGYITMDSFEDGATLTLPNQVLRYEATGEYYRWDGAFPKAVAAGSTPASTGGVGLGAWISVGDAAFRQEANKKFKYSVKLSDYSTLQEAATAAVDGVLIDRDYTFTDNETVDFGGKVLTIDCKAKFIGDGALIFTNMGSGSIIEKPFMESATTPWVIYPWTEDGKWITDAQAVAATLKQSKTEGYQPGVSDWVKFPGLEALIPQNVKDQHVASTLDIRECVGIEVRSAGGLMAAYLFRNCHHCKVIDSDTIIGGKEGIITFENLSGEWGIGNYAIGGRVHYGSGSGVQFLRNNGGASHNGGVIGVTSWRAGESGFKTWQGSVGAGTARNYNLQFRDSVALSPVWDGFDLGSDPGMAPEDDRPGDLPVSQYPMHQLPNNHMVDNILVMNSLGVGLGMDGRDGYVSNVTVQDCAGAGMLAYTFNRTFSNITVIDCNYMNFDSDQIIIIGDCIVNGIRAAGIKPQPSKGMVISAPNSTLSGVVGNVPSDRILAGNIIDSALGQTRINGFNSDSVEMGLRVHKLTKTLDSGAIRSTLNGGPGSGSAWTEITAISRSLPDAVSLKINRGDYHAVEIPVAVTVLPDAAVRDNGSIALYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:675 AA
molecular weight: 72229,26130 Da
isoelectric point:5,03323
aromaticity:0,08889
hydropathy:-0,13763

Domains

Domains [InterPro]
DC_1559
ATT
1–175
DC_1559
G3DSA:2.10.10.80
ATT
63–119
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
64–123
IPR040775 IPR011050
IPR011050
STR
126–675
IPR011050
IPR015331
RBD
129–675
IPR015331
XFC47957.1
1 675
Architecture
ATT
STR
ATT 1-175 | STR 176-675
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFC47957.1
1 675
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9902
Central domain 147 588 443 0,9837
C-terminal 589 675 86 0,8839
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-588
C-terminal
589-675

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_CECAV_048
[NCBI] 		3248863 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFC47957.1 [NCBI]
Genbank nucleotide accession
PQ186186.1 [NCBI]
CDS location
range 31426 -> 33453
strand +
CDS
ATGGCTACCACACCGACTAGCTTACCAATCCCGTCAGAAGACCCGCGCGACCTGAAGTTTAACGCTGGTAAATTTGATGAAGTCATGACATCTGATGCACATTACTATGTGGACAGATTTGGCGTAAAACGCTGGACTATTGCTGGATTCCAGTACACTGCGGAAGAGGCCATTCGTGCTTATGGATATATCACAATGGATAGCTTTGAAGATGGCGCGACGTTGACGCTACCAAATCAGGTGCTACGTTACGAGGCAACCGGAGAATATTACCGATGGGATGGTGCATTTCCTAAGGCTGTAGCTGCTGGTTCAACTCCTGCATCAACTGGTGGCGTTGGTTTAGGCGCGTGGATTAGTGTTGGTGACGCAGCATTTAGACAGGAAGCCAACAAAAAATTCAAATATTCAGTAAAATTATCAGATTATTCTACCTTGCAGGAAGCAGCAACAGCAGCAGTTGACGGAGTGTTGATTGACCGCGACTATACATTCACCGACAACGAGACAGTTGATTTTGGCGGCAAAGTACTAACCATCGACTGTAAAGCTAAGTTTATTGGTGATGGGGCTTTGATTTTCACTAATATGGGTAGTGGTTCTATAATAGAAAAGCCTTTCATGGAGAGCGCTACGACCCCGTGGGTTATTTACCCCTGGACAGAAGATGGGAAGTGGATTACAGATGCACAAGCTGTCGCTGCTACACTTAAACAATCTAAGACTGAGGGGTATCAACCGGGAGTTAGTGATTGGGTCAAGTTCCCTGGTCTTGAGGCATTGATACCACAGAATGTAAAAGACCAGCATGTAGCGTCCACGCTGGATATCCGTGAGTGTGTAGGTATTGAGGTCAGAAGTGCTGGTGGACTTATGGCTGCTTACTTGTTCCGCAACTGTCATCATTGTAAGGTGATTGATTCTGACACCATCATTGGTGGTAAAGAAGGCATCATCACCTTTGAAAACTTAAGTGGTGAGTGGGGCATCGGCAACTATGCCATAGGTGGCCGTGTGCATTATGGCTCAGGTAGTGGTGTGCAGTTCCTTCGAAACAACGGAGGTGCGTCGCACAATGGTGGGGTTATTGGTGTGACGTCATGGCGCGCGGGTGAGTCTGGGTTTAAAACATGGCAAGGCTCTGTAGGTGCCGGTACAGCTCGCAACTATAACCTTCAGTTCCGTGACTCAGTTGCATTATCTCCAGTGTGGGACGGCTTTGACTTAGGCTCAGACCCGGGAATGGCGCCGGAAGACGATAGACCGGGAGATCTACCTGTATCTCAATATCCTATGCATCAGCTACCTAATAACCACATGGTTGATAACATCCTTGTTATGAACTCATTAGGTGTAGGTTTAGGCATGGATGGTCGTGATGGTTATGTGTCGAATGTTACCGTGCAGGATTGTGCGGGCGCTGGTATGCTTGCTTACACATTCAACCGTACCTTCTCTAACATTACGGTGATTGACTGCAACTATATGAACTTTGATTCAGACCAGATAATCATCATTGGTGACTGTATTGTAAATGGTATCCGAGCCGCAGGCATTAAGCCTCAGCCATCCAAAGGTATGGTCATCAGCGCACCTAACTCGACCCTAAGTGGTGTTGTAGGTAACGTGCCATCAGACCGTATTCTTGCTGGTAACATTATTGATTCTGCGTTAGGGCAGACAAGGATTAATGGGTTTAATAGTGACTCGGTGGAAATGGGTTTAAGAGTCCATAAGCTTACCAAAACCTTGGATAGTGGTGCTATTCGCTCTACGCTGAATGGTGGCCCCGGTTCTGGTTCCGCCTGGACTGAAATTACGGCTATTTCTAGGTCATTACCGGATGCGGTATCACTAAAAATTAACCGCGGCGACTATCACGCGGTAGAAATACCAGTAGCCGTTACCGTGCTACCCGATGCTGCCGTTAGAGATAATGGCAGCATCGCACTATACCTAGAAGGCGATAGTCTTAAAGCATTAGTTAAGCGCGCAGACGGCAGCTATACAAGATTGACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e59b34898209e374852d0e20f8ca0988821fece9c2cb7df64c47e8821d3d1c70
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50