Protein

View in Explore
Genbank accession
QBX25636.1 [GenBank]
Protein name
hyaluronidase
RBP type
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MDVFRRQKFNEAMFAKNRTLAIRVGQYQSSDIKEASFEYGYIKGDAYKPGGTCAGSGKITFTSIITTFNKLDKIYPEIGLLVDGTYEWVKMGEYFINDIEIDRNRNTTTLDLMDGMFKLNHEYVTDLTFPAEIRQVVKEICLKAGVELANENMDIASMNYAIETKPKENKMTFRDVLSLATQMLGMSCFFNREGKLEIKELTDSGIVITADNYFLHGLTRSEVEYQIAGITCKKDKEGLTVGTRTGRSLEIENPFMTQSILDNLYHKIKDIRYYPFNLNFQGHLLLDVGQWVTIKTNKGETFKSPVLSQSFSFKGGLRSRISADSKAGNDAQYSYAGTITKKIEQFSEFEKQLQNQIEEADRGFDAKTDQIKQDFSDQIKLIEAKAEENKRALSDEIDRRFHDFSPAGFEEAKAKAEEALRKVGAGYELADEAKHIADQNSVIFAGLVDKFNKQEDKLGDTITDLKRYAREESASQARAVREDVTRDFVGKSTFQENVQGVERRLESLSLGTSGNLLKNSNNGFYNQKNKRYRLVETLQANQTYTLVTKYWHGEKSAGHTFLDGIGNWRHLTYNRAIDAWMVQFTPTQEIPAGTEITLSSHPADAKGNMNWATLVRGVIPLIHWQPAKGDVEEGVTQKLAEYKETVDGRFATISSQVNGKVNQSDFQRVKETSQLYERILGSAESDVSNNVSRMVMSSQIFQTEVGKFLTDDINLVYDPTNLSKWAKKQAEANVIEVQAGTKLLRITSTGKSQAVYNGFALPLNTSTFTNGEKLSYRIEAWVDVLPDGPLGIELWNDNSVIASDRVTFNKTGIQIITGTMTVNKTVTKTREFPLEIWLMKNGQVAIGQVSLIRGDKPPKKFNDNTSTQDVVTQTQVSQLHDSYAIQTLTGPGAISSQINLNSNNILIEAAKIRLKGRTLLDEITAIDGYFKRLFVGDARIGTLNTDIIRSNSIAADKLIFDTALAKKLVASDVFTDTLAAKTAFINKLRSVVVSATLLEGYKGKIGGFQFGTHDKDPTTFWITGSNSFRVGMSDGGWRVKQTALWVNWGNNWDKPGNYAWFVNNDGEMHCYNKAQFWNVPRVHGNLEVTGDIFYFIDKEKNKVGYWVHSPSYKRLEESNGYIYLYRQAGGYSWIPLNKEISDRRYKTNIQDSPVSALDVIDKLKTYSYRKEYDDKVEDISCGIMAQDVQKYAPEAFYENPDGAYSYRAFELVPYLIKAIQELNQKVERLEKTT
Physico‐chemical
properties
protein length:1233 AA
molecular weight: 139256,37410 Da
isoelectric point:6,43852
aromaticity:0,10219
hydropathy:-0,48054

Domains

Domains [InterPro]
DC_1421
STR
3–713
DC_1421 IPR030392
Coil
Unmapped
339–359
Coil DC_0720 Coil
IPR030392
CHP
1141–1195
IPR030392 DC_0312
QBX25636.1
1 1233
Architecture
STR
RBD
STR 3-1211 | RBD 1212-1233
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan266
[NCBI] 		2548082 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus infantis
[NCBI] 		68892 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25636.1 [NCBI]
Genbank nucleotide accession
MK448891 [NCBI]
CDS location
range 27529 -> 31230
strand +
CDS
ATGGACGTATTCAGACGACAGAAATTCAATGAAGCGATGTTTGCTAAAAACCGTACTCTTGCTATCAGAGTAGGACAGTATCAATCAAGTGATATCAAAGAAGCTAGTTTTGAGTATGGATACATCAAGGGTGATGCTTACAAGCCGGGTGGAACATGCGCCGGAAGTGGTAAGATTACGTTCACAAGTATTATCACAACATTCAATAAGCTAGATAAGATTTACCCTGAAATCGGCCTTTTGGTCGACGGAACCTATGAATGGGTGAAGATGGGTGAATATTTCATCAATGATATTGAAATCGACCGAAACCGTAACACGACTACGTTAGACCTCATGGACGGGATGTTTAAACTCAATCATGAGTATGTAACAGACTTGACTTTCCCGGCAGAAATCAGGCAAGTGGTCAAAGAAATCTGCTTGAAGGCCGGCGTAGAATTAGCAAACGAAAACATGGATATCGCATCCATGAATTATGCGATTGAAACGAAGCCAAAAGAAAATAAGATGACATTCAGAGATGTTTTGAGTCTAGCTACTCAAATGCTCGGAATGTCTTGTTTTTTTAACCGGGAAGGAAAGCTCGAAATCAAAGAGTTGACCGACTCAGGTATCGTGATTACCGCAGATAATTACTTTTTACACGGATTGACCAGAAGTGAAGTCGAGTATCAGATTGCAGGTATCACTTGTAAGAAGGATAAAGAGGGATTGACTGTCGGAACTCGTACAGGTCGCTCACTTGAAATCGAAAATCCGTTCATGACACAATCGATTTTGGATAATCTTTATCACAAAATCAAGGATATTCGATACTATCCATTCAACTTAAACTTTCAAGGTCATCTTCTGCTCGATGTTGGCCAATGGGTAACAATCAAGACAAACAAGGGAGAAACGTTCAAATCTCCAGTATTGAGTCAGTCTTTCAGCTTTAAAGGTGGACTTCGTAGTCGAATCAGTGCTGACAGTAAGGCTGGGAATGATGCGCAGTATTCATACGCTGGGACAATCACAAAGAAGATTGAACAATTCAGCGAATTTGAAAAGCAACTTCAAAATCAAATTGAAGAAGCAGACAGAGGATTCGATGCCAAAACCGACCAAATTAAACAAGATTTCAGCGACCAAATCAAGCTCATTGAAGCCAAAGCAGAGGAAAACAAGCGTGCTTTATCGGATGAAATCGACAGACGATTTCATGATTTCAGCCCAGCGGGATTTGAAGAAGCAAAAGCCAAAGCAGAAGAAGCACTACGAAAAGTTGGGGCAGGTTATGAGCTTGCTGATGAAGCGAAGCATATTGCAGACCAAAACAGTGTTATATTTGCTGGATTGGTAGACAAGTTCAATAAGCAAGAGGATAAGTTAGGGGATACTATCACCGACTTGAAGCGTTATGCTCGTGAGGAGAGTGCTAGTCAGGCTAGAGCGGTTCGTGAAGATGTAACAAGGGATTTTGTCGGAAAAAGCACTTTCCAAGAAAACGTTCAGGGCGTTGAAAGACGTTTAGAAAGTCTCTCTCTTGGAACAAGTGGGAACTTGCTGAAAAATAGTAATAACGGATTTTACAATCAGAAAAATAAACGATATAGACTCGTTGAAACCTTGCAAGCAAATCAGACTTATACTCTTGTAACGAAATATTGGCACGGAGAGAAATCAGCTGGTCACACTTTTCTAGACGGAATTGGAAATTGGCGACATCTTACTTATAATAGAGCGATTGATGCCTGGATGGTGCAATTTACACCGACTCAAGAAATTCCAGCTGGCACTGAAATCACTTTATCTTCTCACCCAGCTGACGCTAAGGGCAACATGAATTGGGCTACACTTGTCCGTGGAGTAATCCCACTTATTCATTGGCAACCTGCTAAAGGTGATGTAGAGGAAGGCGTTACACAGAAGCTAGCCGAATACAAAGAAACCGTAGACGGTCGTTTTGCTACAATTTCTAGCCAAGTAAATGGGAAAGTTAATCAGAGTGATTTCCAACGTGTGAAAGAAACAAGTCAGCTTTACGAGCGAATTTTGGGTAGTGCTGAAAGCGACGTATCCAACAACGTTTCAAGAATGGTTATGAGTAGTCAAATATTTCAGACTGAAGTTGGAAAGTTTTTAACAGACGACATAAACCTGGTATATGATCCAACGAATTTAAGCAAGTGGGCCAAGAAGCAAGCAGAAGCGAATGTTATCGAGGTTCAAGCTGGAACTAAGTTACTACGAATTACATCCACTGGCAAATCTCAAGCAGTATACAACGGGTTCGCATTGCCACTTAACACCTCTACTTTTACGAATGGTGAAAAGCTAAGTTATCGCATTGAAGCATGGGTAGATGTACTGCCAGATGGACCACTTGGAATTGAATTGTGGAACGATAACAGTGTTATTGCGTCTGACCGAGTGACTTTCAACAAAACCGGCATACAAATCATTACAGGTACGATGACGGTCAATAAAACGGTAACGAAAACAAGAGAATTTCCTCTTGAAATTTGGCTGATGAAGAACGGACAGGTCGCAATCGGTCAGGTATCACTTATCAGAGGTGACAAACCGCCTAAAAAATTTAATGACAACACATCGACTCAAGACGTTGTGACTCAAACTCAAGTGTCACAGTTGCATGATTCCTACGCTATCCAAACCCTTACGGGGCCTGGTGCGATTTCTTCTCAAATAAATTTAAATAGCAATAACATTCTGATTGAAGCTGCTAAAATCCGACTCAAAGGTAGAACACTTCTAGATGAAATCACAGCCATAGACGGGTATTTCAAGCGATTGTTCGTAGGAGATGCACGGATTGGAACATTGAACACTGACATCATTCGCTCGAATTCGATTGCAGCAGACAAATTGATATTTGATACGGCCCTAGCGAAGAAGCTTGTCGCAAGTGACGTATTCACAGACACACTCGCTGCTAAAACGGCATTTATCAACAAGCTACGCTCAGTAGTAGTATCTGCCACCTTACTCGAAGGTTATAAGGGGAAAATCGGTGGATTCCAATTCGGTACACACGATAAAGACCCGACTACATTCTGGATTACAGGAAGTAATAGCTTCCGTGTCGGTATGTCAGATGGGGGATGGCGAGTCAAACAAACAGCCTTGTGGGTTAACTGGGGTAATAACTGGGATAAGCCAGGGAATTATGCCTGGTTCGTAAACAACGATGGCGAGATGCATTGCTACAACAAGGCGCAATTCTGGAATGTCCCTCGTGTCCACGGAAATCTTGAAGTCACTGGCGATATCTTCTATTTCATCGATAAAGAAAAGAATAAAGTTGGGTATTGGGTTCATTCGCCTTCTTATAAGCGCCTTGAAGAGAGTAACGGATACATCTATCTATATCGACAAGCTGGTGGATATTCTTGGATTCCTTTGAATAAAGAAATCTCAGACCGTAGATATAAGACCAACATTCAAGATAGTCCAGTATCAGCTCTTGATGTAATCGATAAGCTAAAAACGTACTCTTATCGCAAGGAATACGATGACAAGGTTGAAGATATTTCATGCGGTATCATGGCTCAAGATGTCCAGAAATACGCACCTGAAGCATTCTATGAAAATCCAGACGGTGCTTATTCATATCGCGCATTCGAACTTGTGCCTTATCTCATTAAGGCAATTCAAGAACTTAACCAAAAAGTAGAAAGGTTGGAGAAAACAACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
593eb8494c75ed2e7dcaef2c04a58e671f6bfab106bf61c66d0d3971c0c31c88
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank