Protein

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Genbank accession
AUG84865.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSIQVAGIIEGPLGTPSPGITIRVVSKISYRNTYRLSTEDHVTTTGGAYDFQLNEGFHKILIRYRGASSFTKLGDVSVSDQTPSPITLINLLESSSPKALVVKIQELADDASESAQSASDDADQVALDRQQVTLLAQQVSDDADQVALDKVATAQSEANAAQSATNASQSEANAQQSADDAAAIVPNLQSQIDDRVTYPELTTAQGDVLGGKLFKGSNGEAVENGDVVEPGTTHLRVLVGGKPAIVAMSPASSGGVSSINEKSATIGGVLVALVPNFNNEFTSVQEMKDSPTMIGGKITTTQYHDGTGYGGAEYINRGQGWPVVADGYVNHGSFNGHFLELIYDEKINILKAGAKPGDYSFDNRERILAATKIAGAYVPEGKFYSTPIRPNRDYDNKSITGAGYNSMLSLISSATEAPGVPLLHIPRNGGAYGGAEEGAKNFFVDMVHLHGGDANATYTTTGLVVENSFGFKFGTLWSSGFYKSGMLIDGTCEKFHGGVYYGFSNGNQVGASTGGQGFAISAENSDTPQLHIDYAECWDNGVSNFGQGADFVSGNFTIGTLLTYLNGSSGAKIVNAISVNISKYKSRNNNLHTGQAFGGLYTNGDFGTLTIDDYDSEEAAASGLSLTKSGHIVIGKYKSVGAGGSGITVSPESGKKCSLSVDSADIEQASVTSLTMSGSGDSEVRFGKFKSKESSNQGAVVTNGHLHVDKFESEDNAGTPLFLSAGDDHYVGQFISTSQVENAAIVVGAAVNNACIISARSKGAHTATISDSGTNTYKPNVI
Physico‐chemical
properties
protein length:782 AA
molecular weight: 81766,11480 Da
isoelectric point:4,93234
aromaticity:0,07673
hydropathy:-0,23491

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUG84865.1
1 782
Domain Start End Length (AA) Confidence
N-terminal 1 362 362 0,9953
Central domain 363 760 399 0,9783
C-terminal 761 782 21 0,7504
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-362
Central
363-760
C-terminal
761-782

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Athena1
[NCBI] 		2060111 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUG84865.1 [NCBI]
Genbank nucleotide accession
MG640035.1 [NCBI]
CDS location
range 12404 -> 14752
strand -
CDS
ATGAGCATTCAGGTAGCTGGCATTATAGAGGGTCCACTAGGAACCCCGTCGCCAGGAATAACAATCCGTGTTGTATCAAAGATAAGCTACAGAAACACTTACCGACTATCCACAGAAGACCACGTAACCACAACTGGCGGCGCTTATGATTTCCAGTTAAATGAAGGTTTTCACAAAATATTAATCCGCTACCGTGGCGCGTCATCATTTACAAAACTTGGCGATGTTAGTGTTAGCGATCAAACTCCGTCACCAATCACTCTAATCAACTTACTTGAATCATCATCACCTAAAGCGCTAGTGGTTAAAATTCAAGAGTTGGCTGACGATGCAAGTGAATCCGCTCAAAGCGCATCGGACGACGCCGACCAAGTTGCATTAGATAGGCAGCAAGTCACTCTGCTAGCCCAACAGGTTTCCGATGACGCCGATCAAGTTGCGTTAGATAAAGTTGCAACTGCTCAATCTGAAGCGAATGCAGCTCAAAGCGCAACCAACGCCTCACAAAGTGAAGCGAACGCCCAGCAGAGCGCAGACGATGCCGCCGCTATTGTCCCAAACTTGCAATCTCAGATAGATGATAGGGTAACTTACCCTGAACTAACCACCGCTCAAGGCGATGTCTTAGGCGGAAAGTTATTTAAAGGCTCGAATGGTGAGGCTGTAGAAAATGGGGATGTCGTAGAACCAGGCACTACACACCTTCGTGTTTTGGTTGGTGGTAAGCCAGCGATTGTTGCTATGTCGCCAGCAAGTAGCGGGGGAGTAAGTTCTATAAACGAAAAAAGCGCTACGATAGGTGGAGTTCTGGTAGCTTTGGTTCCAAATTTTAACAATGAATTTACTAGCGTTCAGGAAATGAAAGACTCGCCAACCATGATCGGAGGAAAAATTACAACAACACAGTATCATGATGGCACTGGATACGGTGGGGCCGAATATATAAATCGTGGTCAGGGCTGGCCTGTGGTTGCTGACGGATATGTAAACCACGGTTCTTTTAACGGCCATTTTTTAGAATTAATCTATGATGAAAAAATAAACATCCTAAAGGCGGGGGCTAAACCCGGTGACTATTCTTTTGATAACAGAGAGCGAATTTTAGCGGCCACAAAAATAGCAGGCGCCTACGTTCCAGAGGGTAAATTTTACTCCACACCAATTCGACCTAATAGGGATTATGACAATAAATCCATTACCGGGGCCGGGTATAACTCAATGCTATCTCTGATAAGTTCGGCGACTGAAGCGCCTGGTGTTCCATTGTTGCACATACCGCGAAATGGTGGAGCATACGGAGGAGCAGAAGAAGGTGCTAAGAACTTCTTTGTAGACATGGTTCATCTTCATGGTGGAGACGCAAATGCTACATACACCACAACAGGCTTGGTTGTTGAAAATTCATTTGGGTTTAAATTTGGAACTTTGTGGAGCAGTGGGTTCTACAAGTCAGGCATGCTGATTGATGGTACGTGTGAAAAGTTTCACGGTGGTGTTTATTATGGCTTTTCAAACGGCAATCAGGTTGGGGCTTCTACGGGAGGTCAGGGGTTTGCAATTTCAGCAGAGAACTCGGACACTCCGCAGTTACATATAGATTACGCCGAATGCTGGGATAATGGTGTTAGTAACTTTGGTCAAGGTGCTGACTTTGTTTCTGGTAACTTTACGATTGGAACGCTTCTAACCTACTTAAATGGATCAAGTGGAGCCAAAATAGTTAATGCGATATCGGTAAACATAAGCAAGTACAAATCGAGAAACAACAATCTTCACACAGGACAAGCTTTTGGTGGTTTGTACACAAATGGTGATTTCGGAACCTTAACTATTGATGACTACGATTCTGAGGAAGCTGCAGCATCTGGTCTGTCTTTAACAAAAAGCGGCCATATAGTTATAGGAAAATATAAGTCTGTTGGCGCAGGCGGTAGCGGAATTACTGTCTCACCAGAATCAGGAAAAAAATGCAGCCTTAGCGTTGACTCAGCGGATATAGAGCAAGCATCAGTGACAAGCTTGACCATGAGTGGTTCTGGAGATTCAGAGGTGAGATTTGGGAAATTTAAGTCCAAAGAAAGCTCCAACCAGGGGGCCGTCGTGACGAATGGTCACCTTCATGTCGATAAGTTTGAATCAGAAGATAACGCGGGAACTCCTTTGTTCCTAAGCGCAGGAGATGACCATTACGTGGGGCAGTTTATATCAACATCTCAAGTGGAAAATGCTGCTATAGTTGTTGGCGCTGCGGTCAATAATGCATGCATAATTTCAGCAAGAAGCAAGGGAGCCCACACTGCAACCATTAGCGATAGTGGTACAAATACTTACAAACCGAATGTCATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
48f489a7e571ee432616c0de020ea3c75b6a4bd5d31c578d8864c38945c79af2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8212
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genomics of small Myoviridae Vibriophages Skliros,D., Kalatzis,P.G., Katharios,P. and Flemetakis,E. 2009-12-11 — GenBank