Protein

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Genbank accession
XPO96477.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MALILHYTRNEDGTFDRKRYNVPPMEYVVANIPDGVPVRIYRGEIGDDTDVTENFEALKEDDVFHIIEGAGGGGGFLGKLLDPLGVLKFVTKLISPSQKTPKTSLANQQAESPNNSLTDRNNKPRPYERSYDICGRVQTIPNNLMTTYKVFNDAGVVVEYGYYDAGRGYLDIKAEDITDGDTKVQEITGTSVAVYAPFTSPNNTNTPQLLVGDPINQNLYITIASNEVDGAVLKAQNDIRVNPSDTGEISLQGATGVVRDNTGDSAFSEILSVGDIAVFNLILVKDVANVSGSYTVTYVDDFEVRVAAGGMLSEWQKLPSGFTPLTQGTEAWISPSNTYDKSLTDWTTLNRLEVERVVANIAAANGMYKDNGSKLRTSVTVELQYQLLDETGVPYGDVYSKQSVISGRSADYTGVTIYADLPMRSKVRVRARRVTDLDLSFEGTVVDEVSYINLYGQVRDTTPHYGNRTTVHSARKQTPRAAEIKQPQLRMVATEMVYKYLGNGTFDTVMTPNTQAIQSLIRLARDPVVGNLNLTTSNMDKLLATQTEIENYFGSAEAGQFCYTFDDYKMTMQDIISTIADAIFCTPYRKGQDILLDFERPRIGPEMVFTHRSKTTASEKWTRTFNDAQVYDSLKFSYIDPDTNVKETISIPAEGGVNTETYDSKGIRNYRQAYWAAYRRYQKNLLKKVTVSFTATEEGVFVLPGRAISVVKGSRVAPQDGYVVAVNGLTLTLSQPVTFTPGDDHSLILKKRDGGVQSVAVVPGSHDREVVMLSAPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGINYEADFYKYDGVAPFGSGFSGGFSNGFS
Physico‐chemical
properties
protein length:850 AA
molecular weight: 93604,66330 Da
isoelectric point:5,05847
aromaticity:0,09294
hydropathy:-0,34000

Domains

Domains [InterPro]
DC_0118
STR
1–683
DC_0118 DC_0808
NF040662
Unmapped
353–830
NF040662
XPO96477.1
1 850
Architecture
STR
RBD
STR 1-683 | RBD 702-843 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO96477.1
1 850
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9909
Central domain 233 431 200 0,4885
C-terminal 432 850 418 0,1166
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-431
C-terminal
432-850

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EF2-1
[NCBI] 		3385240 Viruses >
Host Escherichia fergusonii
[NCBI] 		564 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO96477.1 [NCBI]
Genbank nucleotide accession
PQ571290 [NCBI]
CDS location
range 30278 -> 32830
strand +
CDS
TTGGCGCTGATATTACATTACACCCGTAACGAAGACGGTACTTTTGACCGCAAACGGTATAACGTACCCCCGATGGAATACGTCGTTGCTAACATCCCAGACGGGGTACCTGTGCGTATTTACCGCGGAGAGATTGGTGATGATACAGACGTAACGGAAAACTTCGAAGCGCTGAAAGAAGATGACGTTTTCCATATCATCGAGGGCGCTGGCGGCGGCGGTGGTTTTCTGGGTAAACTCCTGGACCCTTTGGGTGTGCTTAAATTTGTTACCAAGTTGATTTCTCCGTCGCAGAAAACGCCTAAAACGAGTTTAGCGAACCAGCAGGCGGAGTCCCCCAACAACAGCTTGACGGACCGAAACAATAAACCGCGTCCGTATGAACGGTCGTATGATATTTGCGGCAGGGTCCAGACTATCCCTAATAACCTCATGACTACGTATAAGGTCTTCAACGACGCAGGTGTGGTAGTTGAATACGGCTACTATGACGCCGGTCGCGGGTATCTTGATATTAAAGCCGAAGACATCACCGATGGCGATACTAAAGTACAGGAGATTACAGGAACTTCTGTAGCGGTATACGCCCCATTTACATCCCCTAACAATACAAATACGCCTCAGCTTCTGGTGGGGGACCCTATCAATCAGAATCTGTACATAACTATTGCCTCGAACGAGGTAGATGGGGCCGTTCTTAAAGCGCAGAACGATATCAGGGTTAATCCCAGTGATACCGGTGAGATTTCATTGCAGGGGGCAACTGGTGTCGTCCGCGATAACACTGGCGACTCTGCTTTCTCTGAGATTTTATCGGTTGGGGACATAGCTGTTTTTAACCTTATTCTGGTAAAAGACGTGGCTAACGTCAGTGGTAGCTATACTGTTACATACGTAGATGACTTTGAGGTAAGAGTAGCCGCCGGAGGGATGTTGTCAGAATGGCAAAAATTGCCATCGGGATTCACTCCTTTAACGCAAGGTACCGAAGCATGGATTTCACCGTCGAACACTTACGATAAGTCGTTAACGGACTGGACTACTTTAAACCGCCTGGAAGTTGAACGCGTAGTAGCCAACATCGCTGCCGCGAATGGTATGTATAAAGACAACGGCAGTAAATTGCGTACATCTGTAACTGTGGAGCTTCAGTATCAACTCCTTGATGAAACTGGCGTGCCGTACGGTGATGTTTACTCAAAACAGTCCGTTATATCAGGTCGTTCTGCAGATTACACAGGTGTTACTATTTACGCCGACTTGCCCATGCGGTCGAAAGTTAGGGTACGTGCCCGCCGCGTCACTGACCTGGACCTCAGTTTTGAGGGAACCGTGGTAGACGAGGTTTCCTACATCAATCTTTATGGGCAGGTACGCGACACTACACCACATTACGGCAACCGTACTACCGTGCACTCCGCACGTAAGCAGACGCCGCGGGCAGCGGAGATTAAGCAACCACAGTTACGTATGGTCGCCACAGAGATGGTGTACAAATACCTCGGCAACGGCACATTCGACACGGTTATGACGCCGAATACTCAGGCGATTCAGTCCTTAATCCGTCTCGCCCGCGACCCGGTAGTAGGTAATCTCAACCTAACAACATCCAATATGGACAAGTTGTTAGCTACTCAAACTGAGATAGAAAACTATTTCGGTAGCGCAGAGGCAGGCCAATTCTGCTACACTTTTGACGATTATAAAATGACCATGCAGGATATCATCAGCACAATAGCTGATGCTATTTTCTGCACTCCATATCGTAAAGGGCAGGACATATTGCTGGACTTCGAGCGCCCGCGGATTGGCCCGGAAATGGTGTTCACCCACCGCAGTAAGACAACGGCTTCGGAAAAGTGGACGCGCACATTCAACGACGCTCAGGTATACGATAGTCTTAAGTTCTCCTATATTGACCCCGACACCAACGTAAAAGAGACTATTAGCATCCCCGCCGAAGGTGGTGTCAATACTGAAACGTATGACTCCAAAGGTATACGTAATTATCGTCAGGCGTACTGGGCGGCGTACCGTCGGTACCAGAAGAACCTGTTGAAGAAAGTCACGGTGTCCTTTACGGCGACAGAAGAAGGAGTTTTTGTGCTGCCGGGTCGCGCAATAAGCGTCGTTAAAGGTTCACGCGTAGCGCCTCAAGACGGCTATGTTGTTGCCGTTAATGGTCTTACTCTGACTTTATCACAGCCTGTCACATTTACTCCGGGTGACGACCACTCTTTAATCCTTAAGAAGCGCGACGGTGGTGTCCAGAGCGTCGCTGTAGTTCCTGGAAGCCACGACCGTGAAGTGGTTATGCTCTCTGCGCCTCAGGAGGCGATATACACAGGGAATAGCGCACTAAAAACTGAGTTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTTGACCCAGGAGACGACAGAACGGTTAAGATTACTGGGATTAACTACGAAGCAGATTTCTATAAATACGACGGCGTCGCACCTTTCGGTAGCGGTTTCTCCGGCGGATTCAGCAACGGTTTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2187b935f6faef599cd0bb63cfd6cfe530e7e6ebd07df79069a0418c3feafadd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50