Protein

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Genbank accession
YP_009802166.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MKGWSFSALTKAIKALAFWDAIDVYKAIYPVGICVVFADTTNPNTAFPGTTWMQITDAATIRAVGNASIGNTSGADDVTLTVNQLPSHSHSWSGSVADTDLGNRETWDTDLGTKYTEYAGQHSHQGGMAGPGAAWDSNYIVGSDNDSRRNRNYTTDNGNHQHPIVLGTHRHTFSLGLHAHGVTGSNQNTGGGQSFSVTGKVRGYGVWRRSA
Physico‐chemical
properties
protein length:211 AA
molecular weight: 22558,39610 Da
isoelectric point:6,78421
aromaticity:0,09479
hydropathy:-0,45877

Domains

Domains [InterPro]
DC_0033
STR
3–211
DC_0033
IPR053827
ATT
26–123
IPR053827
SSF88874
STR
28–136
SSF88874
YP_009802166.1
1 211
Architecture
STR
ATT
STR
STR 3-25 | ATT 26-123 | STR 124-211
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Faunus
[NCBI] 		2182346 Uroviricota > Caudoviricetes > Chaseviridae > Faunusvirus > Faunusvirus faunus
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009802166.1 [NCBI]
Genbank nucleotide accession
NC_047978 [NCBI]
CDS location
range 49148 -> 49783
strand +
CDS
ATGAAAGGTTGGTCTTTCTCTGCCTTAACTAAAGCAATCAAAGCTCTTGCATTTTGGGACGCTATTGATGTTTATAAGGCAATCTATCCGGTCGGAATTTGTGTAGTGTTTGCAGATACGACCAATCCAAATACGGCATTTCCAGGAACAACTTGGATGCAGATTACTGATGCTGCAACAATAAGAGCTGTTGGTAATGCCAGTATTGGAAACACATCTGGTGCAGATGATGTAACATTGACAGTTAATCAGTTACCATCTCACTCACATAGTTGGTCTGGTTCTGTTGCAGATACTGACCTTGGTAACAGGGAAACTTGGGATACCGATTTGGGAACCAAGTATACTGAGTATGCTGGACAACACAGTCACCAAGGTGGTATGGCTGGTCCGGGTGCAGCATGGGATAGTAACTATATTGTTGGTTCTGACAACGATTCTCGAAGAAATCGTAACTATACAACCGACAATGGTAATCACCAGCACCCAATCGTACTTGGAACTCACAGGCATACTTTCTCTCTTGGTCTTCACGCACATGGTGTAACTGGTTCTAACCAAAACACTGGTGGTGGTCAATCCTTCTCCGTAACTGGTAAGGTCCGTGGCTATGGCGTCTGGAGACGTTCGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b20d9470491f13d699887228830271b11dcf1747093f2bd26150569ab68c308f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7574
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy in agriculture - a green tech approach to combat plant pathogenic bacteria Djurhuus,A.M., Carstens,A.B. and Hansen,L.H. 1991 — GenBank