Protein

View in Explore
Genbank accession
XQQ55860.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,98
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTATSTVNEAILNNSIVSLSSDGNLGVVDSSIKVINDPEFRTTDNISKGKKMFKITIEADRIIQVLGLYIENTANSSIDAVPFDYIIKNNNVVIYTDNDTIPIKKIIYSKTKSSQLSLSSLGKLLTENLEWTVGTNGTFSNLADALQEASKYISVTNYKITITMKPSYRLTESLHINNANLGHVVLTSEDDYVDFDGTMTPNPSFINQYATCPIAVSFTFGISATISFKLRFSSVPTMFSMAFGFLQTNFKRNNSGVYNAKWGVGSVGCIGLVQNSTFENCTESRVVADNGSILNVWENNTFKTCSGNILWSGLFK
Physico‐chemical
properties
protein length:316 AA
molecular weight: 34697,86580 Da
isoelectric point:5,77395
aromaticity:0,09810
hydropathy:-0,03576

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQQ55860.1
1 316
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9299
Central domain 141 305 166 0,9558
C-terminal 306 316 10 0,0853
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-305
C-terminal
306-316

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage PT14_12670_16
[NCBI] 		3410872 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQQ55860.1 [NCBI]
Genbank nucleotide accession
PV052266.1 [NCBI]
CDS location
range 73773 -> 74723
strand -
CDS
TTGACAGCTACATCAACTGTAAATGAAGCAATTCTTAATAATAGTATTGTATCATTATCAAGTGATGGCAATTTAGGTGTAGTTGATAGTAGTATCAAAGTAATAAATGATCCAGAATTTAGGACAACTGATAATATCAGTAAAGGTAAAAAAATGTTCAAAATAACAATTGAAGCTGATAGAATAATTCAAGTTCTGGGATTATATATAGAAAATACTGCAAACTCATCAATAGATGCAGTGCCTTTTGACTATATTATTAAAAATAATAATGTAGTAATATATACTGATAATGATACAATTCCTATCAAAAAGATAATTTATTCAAAAACAAAAAGCAGTCAATTAAGTTTAAGTAGTTTAGGGAAACTATTAACAGAGAATCTTGAATGGACTGTTGGTACAAATGGAACATTTTCAAATTTAGCAGATGCATTACAAGAAGCTTCAAAATATATATCTGTGACAAATTATAAAATTACTATAACAATGAAGCCATCGTATAGATTAACTGAAAGCCTTCATATCAATAATGCAAATTTAGGACATGTTGTTTTAACATCAGAAGATGATTATGTTGATTTTGATGGAACTATGACACCTAACCCATCATTTATAAATCAATACGCAACATGTCCTATTGCAGTTTCATTTACATTTGGAATATCTGCAACAATATCGTTTAAACTTAGATTTAGTTCAGTACCTACTATGTTTTCGATGGCATTTGGATTCTTACAAACTAATTTTAAGCGTAATAATTCTGGTGTATATAATGCAAAATGGGGTGTTGGTAGTGTTGGATGTATAGGATTAGTACAAAACAGTACATTTGAAAATTGTACTGAATCGCGTGTAGTAGCAGACAATGGTAGTATATTAAATGTGTGGGAAAATAATACATTTAAAACTTGCAGTGGAAATATACTATGGAGTGGCCTATTCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
deaf86e50c94c03d90ffee0256114a5a834e0056b6712d7f0cba9c56f6df113c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6865
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Campylobacter and Salmonella phages isolated in the United Kingdom Mutai,I.J., Gurusinghe,A., Clarke,M., Wang,B., Connerton,P. and Bhandare,S.G. 2021-12-15 — GenBank