Protein

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Genbank accession
AXH71663.1 [GenBank]
Protein name
lectin domain containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANTYLTRTFGSSPSTTLFTWSAWVKRGKLGTQQAMISGCSSHGANTGQLIYFTNDDKLAYYAQASGTVKCNLTTNAQFRDTNAWYHIVLKVDSSQANVANRVVFYVNNVERSYTTTVEHAQNWDAYFMLTTPTDVGRNGMNTSNYFDGVMSHMHMTHGYNYTPSTFGEYDANGVWTIKTSPTVNYNSNGFFILKDGNTGTDHSGNSETFSSGGGTLTKTEDCPSNVFATMNPLDNGQAGTTILLANGNNTFMTNSGSGDYGLKSTLGANSGKYYWEFKDMGQGQTCGTAEMDMRIVINKNGGAGLVGGQNWTVQRYSSSEMNIYNNGTYSRVSTLWGGSNSGDIYSIALDCDNGKIFMQKNGGGYKDLSGNTGDPVNGTNPTFSGLATDGSKYYGAWTENRGNVDNSCHYNFGNGYFGTTAVSSAGTNASGNGIFEYDVPTGYTALSTKGLNL
Physico‐chemical
properties
protein length:454 AA
molecular weight: 48926,87540 Da
isoelectric point:5,73610
aromaticity:0,12115
hydropathy:-0,51828

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
2–164
G3DSA:2.60.120.200 DC_1713
IPR013320
STR
17–156
IPR013320 IPR043136
AXH71663.1
1 454
Architecture
STR
STR
STR 2-164 | STR 167-454
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH71663.1
1 454
Domain Start End Length (AA) Confidence
N-terminal 1 242 242 0,0003
Central domain 243 441 200 0,3148
C-terminal 442 454 12 0,9972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-242
Central
243-441
C-terminal
442-454

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC031P
[NCBI] 		2283017 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71663.1 [NCBI]
Genbank nucleotide accession
MH598800 [NCBI]
CDS location
range 33584 -> 34948
strand +
CDS
ATGGCTAATACATATTTAACAAGAACTTTTGGTTCATCACCATCAACAACTTTATTTACTTGGTCTGCATGGGTCAAACGAGGTAAATTAGGTACACAACAAGCTATGATTTCTGGTTGTTCATCTCATGGTGCAAATACTGGACAATTAATTTATTTTACAAATGATGATAAATTAGCTTACTATGCTCAAGCAAGTGGTACTGTAAAATGTAATCTTACAACTAATGCTCAATTTAGAGATACTAATGCTTGGTATCATATAGTTTTAAAAGTCGACAGTAGTCAAGCAAATGTAGCTAATAGAGTAGTGTTTTATGTAAATAATGTAGAACGTTCTTATACTACAACTGTTGAACATGCACAAAATTGGGACGCATATTTTATGCTAACAACACCTACAGATGTTGGTAGAAATGGAATGAACACAAGTAATTATTTTGATGGAGTTATGAGCCATATGCACATGACACATGGTTATAATTATACACCATCAACATTTGGAGAATATGATGCTAATGGTGTTTGGACAATTAAAACTTCTCCAACTGTAAATTATAATTCAAATGGTTTCTTTATTTTAAAAGATGGAAATACAGGTACAGACCATTCGGGAAATTCTGAAACTTTTTCATCTGGTGGTGGTACACTTACAAAAACAGAAGATTGTCCAAGTAATGTTTTTGCTACAATGAACCCATTAGATAATGGTCAAGCGGGTACAACTATACTACTTGCTAATGGAAATAATACATTTATGACAAATTCAGGTAGTGGAGATTATGGATTGAAGTCTACACTAGGTGCTAATTCTGGAAAATATTATTGGGAGTTTAAAGATATGGGACAAGGTCAAACTTGTGGCACAGCTGAAATGGATATGAGAATTGTTATAAATAAAAATGGTGGTGCAGGTTTAGTTGGAGGTCAAAATTGGACAGTTCAAAGATATAGTTCTAGTGAAATGAACATTTATAACAATGGTACTTATTCAAGAGTAAGTACATTATGGGGTGGTTCAAATTCTGGAGATATTTATAGCATTGCTTTAGATTGTGATAATGGAAAAATATTTATGCAAAAAAATGGTGGGGGTTATAAAGATTTATCTGGTAATACAGGAGACCCTGTAAATGGAACTAATCCAACATTTAGTGGTTTAGCTACTGATGGTTCAAAATATTATGGTGCATGGACAGAAAACAGAGGAAATGTAGATAATTCTTGTCATTATAATTTTGGCAATGGTTACTTCGGAACTACAGCAGTATCTAGTGCAGGAACTAACGCATCTGGTAATGGAATATTTGAATATGATGTACCAACAGGCTATACTGCCTTATCAACAAAAGGATTAAATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc8d9d2f79ea084d186a59d822bac92c69cf08942ad5f1f2304611b3184e6b0b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7713
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50