Protein

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Genbank accession
XCD08699.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVVVLDNQENILQFLDTELSEIHITDEYQGYETLKLSHKLTNVKRDKQLFKQGNKIFVDNCLFVINSECTFDYIDKSIDVDAEEIIVELNNCKPFYIRDPNYASHVNGNTIIISKLFLNKLLKGFFNVTKTDIDSIDYSKRLINVQGSITKYNLLKAIEKQSGLVFKTNYSLKNNNIIKEIQLLKPANYGVTHNKIVESVVIGENTNELSYSSDETKNALGIMPVISSENTDEVDYSKILRQFYNLDVNNNIPPTLFEYDFYIQDIIDCAEKLLVLLDVQKYFPNKFEISHSEIYEDSSKNKVYNVKIGMGQMILLLAEAIINTEDNNSENISLKIVDCADLPSHSHIDCIIKQDEIIQLARIIKSYCITQTKAPNSLSITGGRLSFQYLIYVLAKYLTTKKDVFFNSNELKIIDTVSLTFVQENIHYIKDYENYEYMPFMYTQNTTSSNKIPTITPRQIPGCTILDVEKYISESYPILKIKKIKGASTLGIEITNQGIADDDPNTSMIYFQQPNLIQDESEITIDYKNKSIKFMKYVEKEVEKQVTENVTTGDPNTITVNMMPSCGCCAGTAYKRYTKTWKNYCPNCGKTGTLTDNPKKVYEGEITCSMKKGGCDADYCGYCGGDKWGHGKCKKVKLTPGEAETTTTATKTVKEKVGEYKEITAEYTGDESDSKQNIVNVITKQSKFNYWYGNVTFKLKGCDFVSLTCDTTKLFEFSRFPYVKPRGELYIHALPTLVDFNYLTVCDCNPKLEPFETSEQSVEEVLIGCWQKLNGSGDNTKWLEKNESIKVDLVETPGHNYNVGDFVYVRFPDSEVFKAQITEISYNPYLNGDKEIKIGNVKRESVI
Physico‐chemical
properties
protein length:847 AA
molecular weight: 96565,78190 Da
isoelectric point:5,32140
aromaticity:0,10153
hydropathy:-0,38442

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Methanobrevibacter smithii tailed virus 1
[NCBI] 		3148917 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Methanobrevibacter smithii ATCC 35061
[NCBI] 		420247 Methanobacteriota > Methanobacteria > Methanobacteriales > Methanobacteriaceae > Methanobrevibacter > Methanobrevibacter smithii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD08699.1 [NCBI]
Genbank nucleotide accession
PP537965.1 [NCBI]
CDS location
range 32092 -> 34635
strand +
CDS
ATGGTTGTTGTTTTAGATAATCAAGAAAATATTCTTCAATTTTTAGATACTGAATTATCAGAAATACATATTACTGATGAATATCAAGGATATGAAACATTAAAACTATCACATAAACTTACAAATGTTAAAAGAGACAAGCAATTATTCAAACAAGGAAACAAAATCTTTGTTGATAATTGTTTGTTTGTTATTAATAGTGAATGCACCTTTGATTATATAGACAAATCTATTGATGTAGATGCAGAAGAAATAATTGTAGAATTAAACAATTGTAAACCATTCTATATCCGAGATCCCAATTATGCTTCACATGTAAATGGAAATACAATCATTATCAGTAAATTATTCCTAAACAAATTACTGAAAGGATTTTTCAATGTTACAAAAACAGATATTGACAGTATTGATTATAGTAAAAGATTAATCAATGTTCAAGGCTCAATAACAAAATACAACTTATTAAAAGCTATTGAAAAACAATCAGGATTAGTATTTAAAACAAATTATTCTTTAAAAAATAATAACATTATAAAAGAAATACAATTACTAAAACCTGCAAATTATGGAGTAACACACAATAAAATTGTAGAAAGTGTTGTAATTGGAGAAAATACTAATGAATTATCATATAGTAGTGATGAAACCAAAAATGCATTAGGTATAATGCCAGTAATTTCTTCAGAAAATACTGATGAAGTAGATTATTCAAAAATACTTAGACAATTTTACAATCTTGACGTAAACAATAATATTCCACCAACATTATTTGAATATGATTTTTACATACAAGACATTATTGATTGTGCTGAAAAACTATTAGTACTTCTTGATGTTCAAAAATACTTCCCAAACAAGTTTGAAATATCACATAGTGAAATATATGAAGATTCATCAAAAAACAAAGTCTACAATGTTAAAATAGGCATGGGACAAATGATACTTCTACTTGCAGAAGCAATAATCAACACTGAAGACAATAACTCTGAAAACATTTCACTTAAAATTGTAGATTGTGCAGATTTACCATCACACAGCCATATTGACTGCATCATAAAACAGGATGAAATAATACAATTAGCAAGAATAATCAAATCGTACTGCATAACTCAAACAAAAGCACCAAACAGCTTATCAATTACAGGTGGAAGACTAAGCTTCCAATATTTGATATATGTTCTTGCAAAATATTTAACAACAAAAAAAGATGTTTTCTTTAATTCTAATGAACTAAAAATAATAGACACTGTTTCTTTAACATTTGTACAAGAAAATATTCACTATATAAAAGATTATGAAAACTACGAATACATGCCATTCATGTACACACAAAATACAACCTCTTCAAATAAAATCCCAACCATTACACCACGTCAAATCCCAGGATGTACTATTTTAGATGTTGAAAAATATATCAGCGAATCATACCCTATTCTCAAAATTAAAAAAATAAAAGGAGCATCCACACTAGGAATTGAAATAACTAATCAGGGAATAGCAGATGATGATCCCAATACTTCAATGATATATTTCCAACAACCGAATCTAATTCAGGATGAAAGCGAAATAACTATTGACTACAAAAATAAGTCAATAAAATTCATGAAATATGTTGAAAAAGAAGTAGAAAAACAGGTAACTGAAAATGTCACAACAGGAGATCCCAACACAATAACCGTAAACATGATGCCATCATGTGGCTGTTGTGCAGGAACAGCATATAAAAGATACACAAAAACCTGGAAAAACTACTGCCCAAACTGTGGCAAAACTGGAACATTAACCGACAATCCTAAAAAAGTGTACGAAGGCGAAATAACTTGCAGCATGAAAAAAGGAGGATGTGACGCAGATTACTGCGGATACTGTGGAGGAGACAAATGGGGTCATGGTAAATGTAAAAAAGTTAAATTAACTCCTGGAGAAGCAGAAACAACAACCACTGCAACAAAAACAGTCAAAGAAAAAGTAGGAGAATATAAAGAAATAACTGCAGAATATACTGGTGATGAAAGTGATTCAAAACAAAATATAGTAAATGTAATCACAAAACAATCAAAATTCAACTACTGGTACGGCAACGTAACTTTCAAACTAAAAGGATGTGATTTTGTATCATTAACATGTGATACAACAAAACTTTTTGAATTTTCAAGATTCCCCTATGTAAAACCAAGAGGAGAATTATATATTCATGCTTTACCAACACTTGTAGATTTCAATTATCTCACAGTATGTGATTGTAATCCAAAATTAGAACCATTTGAAACTAGCGAACAATCAGTAGAAGAAGTATTGATTGGGTGCTGGCAAAAATTAAACGGTTCGGGAGATAACACAAAATGGTTAGAGAAAAATGAAAGCATAAAAGTAGACCTTGTAGAAACACCAGGACACAATTATAATGTAGGGGATTTTGTATATGTAAGATTCCCAGATTCAGAGGTGTTCAAAGCACAAATAACAGAAATAAGTTATAATCCTTATCTAAATGGTGATAAAGAGATTAAAATAGGTAATGTTAAACGAGAGAGTGTAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
76da896b8cdad6c208b4e43ace460924890d76e3b18e075f18b6bdc00e76ea10
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6970
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Archaeal virus exists in stable equilibrium with its dominant human gut methanogen host Baquero,D.P., Medvedeva,S., Martin-Gallausiaux,C., Pende,N., Sartori-Rupp,A., Tachon,S., Pedron,T., Debarbieux,L., Borrel,G., Gribaldo,S. and Krupovic,M. 2024-09-04 — GenBank