Protein

View in Explore
Genbank accession
YP_010093065.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MALQPLRATAGLDAAGKRAINFGYPDKSFGGDGVNVDFFIYENTIQPHSPSRTYPKDFAVVYNDRIYISQVAITAPEAFNLNKWKATRVDPSWRVVTSTANLQGNVRQGEYILSQVVGANSVYTMPFDAANGIPAAGDTVVVKDNGFATHDYEIVVNGNGKNINGHPTYRITLAGSTTVFIYNGTEWVAQVWSPGEHNRTYVSSSSYIPGENWFRAKVGDHLVRETQYGGGIRIRLPRYANHGDTIVTYDLDGLNPVTKTELFVYPNSGHKILTGVGATPVDSVKSDTTGFGYFIFDARTNQWRIFESDRAVRWNRIESNYTAILGEKLAVHAAKSTDTITVTFPQDASNGDSFIIDTSYMVQGSKIVLKIPDAQANDYIVPDDNALSTPYVTKYRDIVKDLTKFTTKSESLTIDGRSHQWEFTYFRNALNTGLDVWVLITNSPVPFRVDRNDTSFVGLAAIANQEEVNKNKEQITAGQNRDCEAFVTPETLANKIATMTMRGIARIATDAESKATSGNNEAWNGVIMTPEKVNNRLATETMRGVLTVATQAQANAMSGTGEMWAQTAITPKVLDGRKATETQTGITYQVIQAGAKQAERGTKGVGVHDFDEHYRYVTPKTLFEKVATDTSQGMGFTATQAEANAGTDNHANGPLFVTAKTLHGRQATTELTGLSRAVTDAEMSSNTPPTGDNIHVTPDAIVKRTANETRWGLAETATQAEVDAGVLHDRYFITPLTNKVWLDGTRLTVEDSSGLTTEGTIWKGQKFDIKLATETQRGSLRVATQAESNTMINPIDDTVITPKKLNARVATETLTGIIEIATKAEADTGTDATRAMTPIRVIDSIRTSVNHRMTDSRYGVGMMCVLANDASANTVWQGDDIKGSTRPIGSYANDNIVVSPRALNTALSHYLPILGVAESSRSMDTADGTRVEADDWIRRTVAQTITGAMKFTENVVVEKRTTRIVLNDSGTGHNTCIQYSTKAKDTGWLTGVIVLDGSFIIGTTIDSNMTPVATFGRNGTLTTAGIVSNGGQDPTNANHLTRWDYTENRYMRKTGNFDETITGFKTFQNNTTFSAGAGNAFSIKIGPDSEKAGIYAHPDGTLAIGSNGTLRLRPRSMTDATNQTSIDTNGVMTVASQVKSLATAPKDANDLTRKDYVDGLVDDVTKSADIRVNKKGDNMTGELIITSPQAITANGDVTIKELLTVKRLRIEVGNGEFLEIRPNATTRSVDFVWIS
Physico‐chemical
properties
protein length:1235 AA
molecular weight: 134395,50360 Da
isoelectric point:5,94510
aromaticity:0,07530
hydropathy:-0,36300

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010093065.1
1 1235
Domain Start End Length (AA) Confidence
N-terminal 1 362 362 0,5656
Central domain 363 658 297 0,1387
C-terminal 659 1235 576 0,5134
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-362
Central
363-658
C-terminal
659-1235

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Ah1
[NCBI] 		2053701 Uroviricota > Caudoviricetes > Pantevenvirales > Cinqassovirus > Cinqassovirus ah1
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010093065.1 [NCBI]
Genbank nucleotide accession
NC_055733 [NCBI]
CDS location
range 196941 -> 200648
strand +
CDS
ATGGCTTTACAACCACTTCGCGCAACGGCAGGTTTGGATGCTGCTGGTAAACGCGCTATAAACTTCGGCTACCCGGACAAGTCATTCGGTGGAGACGGCGTTAACGTTGATTTCTTTATCTACGAAAACACAATTCAACCTCATAGTCCGAGCAGAACATATCCAAAAGATTTCGCAGTAGTATACAATGACCGTATCTATATCAGTCAAGTGGCAATTACCGCACCAGAAGCATTCAACCTCAACAAGTGGAAAGCAACTCGTGTTGACCCATCTTGGAGAGTTGTTACTTCTACCGCTAACTTGCAGGGAAACGTTCGTCAGGGTGAATACATCCTATCGCAAGTTGTCGGTGCAAACTCAGTATACACTATGCCGTTCGATGCTGCAAACGGCATTCCGGCTGCTGGTGATACCGTAGTTGTCAAAGATAACGGATTCGCTACACACGATTATGAAATCGTTGTTAACGGTAACGGTAAAAACATCAACGGACATCCAACATATCGCATTACTCTTGCTGGGTCAACCACTGTTTTCATTTACAATGGTACCGAGTGGGTAGCTCAAGTTTGGTCGCCTGGAGAGCATAACAGAACTTATGTTAGTTCGTCAAGCTATATTCCAGGAGAAAACTGGTTCCGTGCTAAAGTTGGCGATCATCTTGTTCGTGAAACTCAGTACGGTGGCGGTATTCGTATTCGTTTGCCACGCTATGCGAATCATGGAGATACAATTGTCACTTATGACTTGGACGGACTAAACCCAGTAACCAAAACTGAGTTGTTTGTTTATCCAAACAGCGGACATAAAATTTTGACCGGTGTTGGCGCAACTCCTGTTGACTCGGTAAAATCCGACACAACCGGATTTGGTTATTTCATCTTCGATGCTCGCACAAATCAGTGGAGAATTTTCGAAAGTGACAGAGCCGTTCGTTGGAACAGGATTGAGTCCAATTATACCGCGATTCTTGGCGAAAAATTGGCAGTTCATGCTGCGAAATCTACAGATACAATCACGGTTACTTTCCCACAAGATGCATCAAACGGTGATAGTTTCATCATTGATACAAGCTATATGGTACAGGGTTCTAAGATTGTTCTCAAGATTCCGGATGCACAAGCGAATGACTACATTGTACCAGATGATAACGCTTTGTCAACCCCGTATGTCACGAAATATCGTGATATCGTAAAAGATCTAACTAAGTTCACAACTAAGTCAGAGAGCTTGACGATTGACGGACGTTCTCACCAATGGGAATTCACTTACTTCCGAAATGCGCTGAACACTGGGTTGGATGTATGGGTATTGATTACAAACTCTCCTGTTCCTTTCCGTGTTGATCGCAATGATACATCATTTGTTGGTCTAGCTGCAATTGCTAACCAAGAGGAAGTGAACAAAAACAAAGAGCAGATCACTGCCGGGCAAAATCGCGACTGTGAAGCATTTGTTACACCAGAAACATTAGCAAACAAAATCGCCACAATGACAATGCGCGGTATCGCTCGTATCGCAACCGACGCCGAAAGTAAAGCAACTTCTGGTAACAACGAGGCTTGGAACGGAGTTATCATGACTCCAGAAAAAGTCAACAACAGACTAGCTACCGAGACAATGCGCGGTGTTTTGACTGTAGCGACCCAAGCACAAGCTAACGCTATGAGCGGCACCGGTGAAATGTGGGCACAGACTGCAATTACTCCAAAAGTCCTTGACGGACGTAAAGCAACTGAAACCCAAACCGGTATTACTTATCAAGTAATCCAAGCTGGCGCAAAACAAGCAGAGCGTGGAACAAAAGGTGTTGGTGTTCATGATTTCGATGAACATTACCGTTATGTTACACCAAAAACTCTGTTTGAGAAAGTAGCAACTGATACCTCACAAGGTATGGGCTTCACCGCAACTCAAGCAGAAGCAAACGCAGGCACAGACAATCATGCAAATGGTCCTCTGTTTGTTACCGCCAAAACTCTGCATGGAAGACAAGCTACTACAGAACTAACCGGTCTGTCAAGAGCTGTTACCGATGCCGAAATGAGTTCTAACACTCCGCCAACTGGCGATAACATTCATGTTACGCCGGATGCGATTGTTAAACGCACAGCAAACGAAACTCGATGGGGTCTGGCAGAAACCGCAACTCAAGCAGAAGTTGATGCTGGCGTTTTGCATGATCGCTACTTTATCACTCCACTGACAAACAAAGTGTGGCTAGACGGTACACGATTGACAGTTGAAGATTCGAGCGGTTTGACTACAGAGGGAACGATTTGGAAAGGTCAAAAGTTTGATATTAAACTAGCAACCGAGACACAACGCGGATCATTGCGTGTAGCTACTCAAGCAGAAAGCAACACAATGATCAATCCGATCGACGACACTGTTATTACTCCGAAAAAGCTTAATGCCAGAGTCGCCACTGAGACTTTGACTGGTATCATTGAGATTGCAACTAAAGCAGAAGCAGACACAGGCACAGACGCTACCAGAGCTATGACTCCAATTCGTGTAATTGATTCAATTCGCACAAGTGTAAATCACAGAATGACCGATAGTCGTTACGGTGTTGGTATGATGTGTGTATTGGCAAATGATGCAAGCGCAAATACGGTTTGGCAAGGTGATGATATTAAAGGATCAACTCGTCCTATTGGAAGCTATGCAAATGATAATATCGTTGTTAGTCCAAGAGCATTGAATACCGCGCTGTCTCATTATTTGCCTATTCTAGGTGTTGCTGAAAGTTCGCGTTCTATGGACACAGCGGACGGAACAAGAGTAGAAGCGGATGATTGGATTCGTCGCACAGTCGCACAGACTATTACCGGAGCAATGAAGTTTACAGAAAACGTCGTTGTTGAAAAGAGAACAACTCGTATTGTTCTTAACGATTCTGGAACCGGACATAATACATGCATTCAATATTCTACAAAAGCAAAAGACACCGGTTGGCTAACTGGAGTGATTGTATTGGACGGTTCGTTTATCATAGGAACAACAATCGATTCTAACATGACTCCGGTTGCGACTTTTGGTAGAAACGGAACACTAACAACCGCTGGAATTGTTTCTAATGGCGGACAAGATCCAACTAATGCCAATCACTTGACACGTTGGGATTATACCGAAAATCGTTATATGCGCAAGACTGGAAACTTTGATGAAACTATTACAGGTTTCAAGACATTCCAGAACAACACAACGTTTAGTGCTGGCGCCGGTAACGCATTCAGTATTAAAATTGGTCCTGATTCTGAGAAAGCTGGTATTTACGCTCACCCGGATGGAACACTTGCAATTGGATCAAACGGAACTTTGCGTTTGCGTCCACGCTCAATGACAGATGCTACCAATCAAACATCGATTGATACAAACGGCGTAATGACTGTGGCTAGTCAAGTTAAATCTTTGGCAACCGCACCGAAAGACGCTAATGACTTAACCCGCAAGGATTACGTCGATGGATTGGTTGACGATGTTACCAAGTCTGCTGATATTCGCGTAAATAAGAAAGGTGACAACATGACTGGTGAATTGATTATTACGTCTCCGCAAGCTATTACAGCAAACGGTGATGTGACTATCAAAGAATTGCTAACAGTTAAACGTCTGAGAATTGAAGTCGGCAACGGCGAGTTCTTGGAAATCAGACCAAACGCAACAACCAGATCTGTTGATTTCGTATGGATTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1616940c15458f7f2bae7527b8c841216090234b2fa6a3e3c0f7da28fe472f0f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5386
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for extension of chilled fish shelf life and decreasing of risk of food-borne infections, bacteriophage strains for its preparation Zulkarneev,E.R., Aleshkin,A.V., Rubalsky,O.V., Kiseleva,I.A., Rubalskii,E.O. and Lebedev,S.N. 2019-10 — GenBank