Protein

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Genbank accession
AVQ09853.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEAGAVVLTSKYLQISKYTTDKAATDASINSINESIGNINTALGGINTTLGTKAAKGANNDITELNALTKAITLTQGGTGATTLEGAKKALQVERLRQQSNGTFIVSPNEKYSLFIYDSGDFGLLDNSTAAVQALKVAFGGTGGTTPKAARKNLNVPVGAWAEKIADGEDVLNYIAVAGQSGYYSSGELIVNGPPKQEGWWAYNFHCHGVDINGAAQYGTLKATGALGSTWINILDGTDNWRGWKEQFNTQSIIQFSNGGTGATSKDGARTNLDIDRFKQSATETMVYAPGSGFRITARPNGEWGTWRDDTGTWVPLAITAGGTGANSADQARKNLELTEWNLLSSMDGKYPNGFNFDTLAVNSKFTVPPTGGNIVGTRPYQQINGLEDAWFFLETLVHPDPNYRMQRATTFTGTWKGSVSVRIMENGTWGVWQQAHGALGQLVNAISNRGAIRVQGAASGESGSLISGTISGGAFTDWRSRPTGVLVEHTGLDSASSVFKNVLWGVDWLAGMDVVGWSAGGAQLNIYCRGAEFHFDSGGNAVAGQWISSSDIRMKANLKEIENARDKVKSLVGYTYYKRNNLVEDRDTLYSIEAGVIAQDVQTVLPEAVYKIEPQKEDSMLGVSHSGVNALLVNAFNELNEVVEKQQQEIDELKELVKQLLAK
Physico‐chemical
properties
protein length:695 AA
molecular weight: 74456,23250 Da
isoelectric point:5,51892
aromaticity:0,08633
hydropathy:-0,27223

Domains

Domains [InterPro]
DC_0195
STR
2–695
DC_0195
IPR030392
CHP
582–682
IPR030392
IPR030392
CHP
582–642
IPR030392 Coil
AVQ09853.1
1 695
Architecture
STR
STR 2-695
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_PHB06
[NCBI] 		2136178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVQ09853.1 [NCBI]
Genbank nucleotide accession
MH102285.1 [NCBI]
CDS location
range 19933 -> 22020
strand +
CDS
ATGTCACGTAATTTAATGCCTAAATCTGGCGCAATGGCGCCTTACGTAGTAGTTAACAGAGACGCCGCAGTTGCCGGCGTTTTCTCTGTTGATGGAGAAGCTGGTGCTGTCGTACTAACATCCAAATATCTACAAATTTCTAAATATACTACTGATAAAGCTGCTACTGATGCATCTATTAATAGTATTAATGAATCAATTGGTAACATTAATACTGCATTAGGTGGTATTAATACTACTTTAGGTACTAAAGCTGCTAAAGGTGCTAATAACGATATTACAGAATTAAATGCACTGACTAAAGCTATTACACTTACCCAGGGTGGTACTGGTGCTACTACATTAGAGGGTGCTAAGAAGGCCTTACAAGTTGAGCGCCTTCGCCAACAGAGTAACGGAACTTTTATTGTATCTCCTAATGAGAAATATTCTTTATTTATATATGATAGTGGAGATTTTGGTCTACTTGATAATTCTACTGCAGCAGTACAAGCATTAAAAGTTGCATTTGGTGGTACTGGAGGAACTACTCCAAAAGCAGCAAGAAAAAATCTTAATGTTCCAGTTGGCGCCTGGGCTGAAAAAATTGCTGATGGGGAAGATGTTCTAAACTATATTGCGGTTGCAGGTCAAAGCGGGTATTATTCATCTGGTGAATTAATAGTTAATGGGCCTCCTAAGCAAGAAGGTTGGTGGGCCTATAACTTCCACTGTCATGGTGTGGATATTAACGGAGCTGCTCAGTATGGTACACTAAAAGCTACAGGAGCACTTGGAAGTACTTGGATCAATATTCTAGATGGTACAGACAACTGGAGAGGATGGAAAGAGCAATTTAATACCCAGTCTATCATACAGTTTTCAAATGGGGGTACTGGTGCTACTTCTAAAGATGGTGCAAGAACTAACCTGGATATTGACAGATTCAAACAAAGTGCTACTGAGACTATGGTATATGCTCCCGGAAGTGGATTTAGAATCACTGCTAGGCCTAATGGGGAATGGGGTACATGGAGAGATGATACCGGTACTTGGGTTCCTTTGGCTATTACAGCCGGGGGTACAGGAGCTAATTCTGCCGACCAAGCTAGAAAAAATCTAGAGTTAACAGAGTGGAACCTTTTATCCTCTATGGATGGTAAATACCCTAATGGGTTTAATTTTGACACTCTTGCTGTAAATAGTAAGTTTACTGTTCCACCTACTGGAGGAAATATTGTTGGTACCCGACCATACCAACAAATAAACGGGTTGGAAGACGCTTGGTTTTTCCTAGAGACTCTAGTACACCCAGATCCTAACTATAGAATGCAAAGAGCCACCACGTTTACAGGAACTTGGAAAGGTTCAGTAAGCGTACGTATTATGGAGAATGGTACTTGGGGTGTATGGCAACAAGCTCATGGGGCTTTGGGGCAATTAGTTAATGCAATCTCTAACCGAGGTGCCATTAGAGTACAGGGGGCTGCAAGTGGGGAATCTGGGTCACTAATAAGTGGTACTATTAGTGGTGGTGCATTTACTGATTGGAGATCAAGACCTACAGGAGTACTAGTAGAACACACTGGATTGGATTCTGCATCTTCTGTATTTAAAAACGTACTGTGGGGTGTAGACTGGTTAGCCGGCATGGATGTAGTAGGCTGGAGTGCCGGTGGTGCACAGTTAAATATATATTGCAGGGGGGCGGAGTTTCATTTTGATAGCGGTGGTAATGCTGTTGCTGGTCAATGGATAAGCAGTTCTGATATTCGCATGAAAGCCAATCTTAAGGAAATTGAGAATGCTCGCGATAAGGTTAAGTCTCTAGTAGGCTATACGTACTATAAGAGAAATAATCTAGTAGAAGACAGAGATACCCTGTACAGTATTGAGGCTGGAGTTATAGCACAAGATGTGCAGACTGTTCTTCCAGAAGCGGTATACAAGATTGAACCACAGAAAGAAGATAGTATGCTTGGTGTGTCTCACTCTGGTGTAAATGCTTTGTTAGTAAATGCTTTTAATGAGCTTAATGAAGTGGTTGAGAAGCAGCAGCAAGAAATTGACGAACTCAAGGAATTGGTAAAACAACTTCTTGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6cbecea70b035300d4c45050a7dbf25889c0010987e9eb83b2569839c8c1a7e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7148
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three Siphoviridae Salmonella enterica serovar enteritidis bacteriophage show promising potential for phage therapy Chen,Y., Sun,E., Wu,B. and Song,J. 2018-11 — GenBank