Protein

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Genbank accession
AUR88952.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPTPSGLVTKQELIDAQLDTAHLGRVVNSKDASGNPINTSMNRTGGVNKTLDALEAEYEQSVRDQFNQFETTFGSQFTYKLIGDISDYEGQSLPEDDKLNAYQYPDDSGAWYAPIQSQAFPITIPTDPTVPGGGWALVNSTSQKWVSDNFSNPNLLADRNPNFLIQTSDESQPLPSATPTSYPPGYQIFSGVFADESLGVTGLTYTNGRPHWTSGNLYLSVPNAGAIANLTSDHLTASVADFDGKPRTRGVSFALVGDEYHVTIGVDALEDVATNETPLASVKFEEGSVATRHSSSTDAGLTDDLVSRASSLTEERRIQSPTGVNVLQDQFFTDSKNPTFPIDFYGDGSSTITLSESEAYAAFDVGVDQVAPDLFRRDYHKYKGLFFTGGENADYGITLRPYTGSQSLFEDLTFMGFGNKDSWCLNFQAQNRWPIIDKFSLSDQGEHINGIKAIDDDTRVIAQGSGNSRVIIDKPRIRYLNGREADTTGIKMAATSAIVHLSAIENASKGLQFHYPSNAAKLQNGYFEQAGSPSGTKSIVIGDDNIVPNNFFFNLYIKDVYSNLHAGNGKFIVMGNASANFRDLVLDGLNIAQTAGQPLIEPNDIPAQSAYVGYVSSGGKTAVLPKEPKSNPVHIVDTYNREWKVINGNGQSSKLSGESKVLPQNAGSILADFWSYVGDISGNYFKRVVTGAERTLLRGATTAVRIASPGAGTYSTITYTIPDISEHAGIDNIIQLFARAEGGTTKTFRVSVKLSTGVTHVLSTTTDDVPQDWTEITVPFFFTNYNDLDDDAIIILEIYGGSLTTQLELTGVRAYEGNTGLCTSNAKSPTEQSMSANPWFYKTKVTIPSGAVNFIVGFDTPVRNLGTITETILLIIDGGSTVAGTLAADGLSASFNVTTGNTAVRTATVSLYHGGS
Physico‐chemical
properties
protein length:916 AA
molecular weight: 98652,91080 Da
isoelectric point:4,73255
aromaticity:0,09498
hydropathy:-0,27467

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR88952.1
1 916
Domain Start End Length (AA) Confidence
N-terminal 1 301 301 0,7872
Central domain 302 609 309 0,9821
C-terminal 610 916 306 0,9502
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-301
Central
302-609
C-terminal
610-916

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.118.B._10N.261.49.F6
[NCBI] 		1881332 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR88952.1 [NCBI]
Genbank nucleotide accession
MG592493.1 [NCBI]
CDS location
range 57707 -> 60457
strand +
CDS
ATGCCAACACCGTCAGGTCTCGTGACCAAACAAGAACTAATCGACGCACAACTCGACACGGCACACTTAGGTCGTGTCGTCAATTCTAAGGACGCTTCAGGTAATCCTATCAACACCTCTATGAACCGTACAGGCGGAGTGAATAAAACACTCGACGCGCTTGAGGCTGAATACGAACAGTCTGTTAGAGACCAGTTTAACCAGTTTGAAACGACGTTTGGTTCTCAGTTCACGTACAAGCTTATCGGCGACATATCAGACTATGAGGGTCAATCACTACCGGAAGACGATAAACTTAACGCATACCAGTACCCCGATGACTCTGGTGCGTGGTATGCGCCAATACAGAGTCAGGCGTTCCCCATCACAATCCCCACGGACCCTACTGTTCCAGGAGGCGGGTGGGCTTTAGTTAATTCTACAAGTCAAAAGTGGGTTTCTGATAACTTTAGTAACCCAAACCTGTTAGCAGACCGCAACCCTAACTTTCTAATCCAAACCTCGGACGAATCTCAGCCGTTACCAAGCGCTACGCCAACAAGTTACCCGCCGGGTTATCAAATCTTTTCTGGTGTTTTTGCTGATGAGTCTCTAGGGGTTACAGGGTTGACTTACACCAATGGTCGTCCGCACTGGACTAGCGGTAATTTGTACCTTTCAGTGCCAAATGCTGGCGCAATCGCTAACTTAACGTCAGATCACTTAACTGCATCTGTTGCCGACTTTGACGGAAAACCCCGCACTCGCGGGGTTTCGTTCGCTTTGGTTGGTGATGAGTATCACGTGACGATTGGCGTTGATGCGCTTGAAGATGTCGCGACAAACGAAACCCCGCTGGCCTCTGTTAAGTTTGAGGAAGGTAGTGTCGCGACAAGGCATAGTTCGTCAACCGATGCAGGATTAACTGATGATCTTGTTTCTAGGGCTTCATCACTCACTGAAGAAAGAAGGATTCAGTCACCTACGGGCGTAAATGTCTTACAAGACCAGTTTTTTACAGATTCAAAAAACCCGACATTCCCTATCGACTTTTACGGTGACGGGTCATCAACCATAACATTAAGTGAGTCTGAAGCATACGCTGCGTTCGATGTTGGTGTTGATCAAGTTGCGCCTGATTTATTCAGACGAGACTATCATAAATATAAAGGTTTGTTTTTTACCGGCGGTGAGAATGCAGATTACGGAATCACACTAAGACCTTACACTGGTAGTCAGAGCTTGTTTGAGGACTTAACATTTATGGGCTTTGGCAACAAAGACTCATGGTGCTTAAATTTTCAAGCGCAAAACAGGTGGCCTATTATTGATAAATTCTCTTTGTCAGATCAAGGGGAGCATATTAATGGTATTAAGGCGATTGATGATGATACTCGTGTTATTGCTCAAGGTTCTGGTAATTCAAGGGTTATCATTGATAAGCCTCGCATCAGATACTTAAACGGTAGAGAAGCGGATACAACTGGAATTAAAATGGCTGCGACATCTGCAATTGTTCATCTTTCTGCAATTGAAAATGCTAGTAAGGGCTTGCAATTCCACTACCCGTCCAACGCAGCGAAGTTGCAAAACGGTTACTTTGAACAGGCGGGTAGTCCATCTGGAACAAAAAGCATTGTAATAGGTGATGATAATATCGTTCCTAACAATTTCTTTTTTAACTTGTACATTAAAGATGTCTATTCAAATCTCCATGCGGGCAATGGGAAATTCATTGTGATGGGTAATGCCAGTGCAAACTTTCGAGATCTTGTTTTGGACGGGCTTAATATTGCTCAAACAGCAGGTCAGCCGTTAATAGAGCCTAACGATATTCCGGCTCAATCGGCGTATGTTGGCTACGTTTCTTCTGGCGGTAAAACAGCCGTTTTACCTAAAGAGCCAAAATCTAACCCTGTTCATATTGTTGATACGTATAACCGAGAATGGAAAGTGATAAACGGTAACGGTCAAAGTTCGAAACTTAGTGGTGAATCGAAAGTGTTACCTCAAAATGCTGGCTCTATTTTAGCTGATTTTTGGTCTTATGTTGGCGATATAAGTGGTAATTACTTTAAGCGCGTTGTGACTGGTGCGGAGAGAACCTTGCTACGGGGTGCGACAACAGCGGTCCGAATCGCATCACCAGGTGCAGGAACCTATAGCACAATCACATATACCATTCCCGACATTTCAGAGCACGCCGGTATAGATAACATTATCCAGTTGTTTGCGAGGGCTGAAGGTGGTACTACAAAGACATTTAGAGTTTCAGTGAAGCTTTCAACTGGTGTTACGCATGTGTTGTCAACAACTACTGACGATGTTCCGCAGGATTGGACTGAAATAACCGTACCGTTTTTCTTTACTAATTATAACGATCTTGACGATGACGCAATTATAATCCTTGAGATATATGGTGGGTCACTGACTACTCAACTAGAGCTAACAGGTGTCAGAGCATACGAAGGGAATACAGGGCTTTGCACATCAAACGCCAAAAGTCCGACGGAGCAATCAATGTCAGCAAACCCTTGGTTCTACAAAACAAAGGTCACAATACCCTCGGGCGCGGTTAACTTTATTGTTGGATTTGACACGCCAGTACGTAATTTAGGTACAATAACAGAAACGATACTGCTAATCATTGATGGTGGCTCTACGGTTGCTGGAACTCTTGCGGCTGATGGTCTATCTGCGTCATTCAATGTAACCACGGGTAACACGGCAGTAAGAACGGCAACAGTATCTCTATATCATGGAGGATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1dd72bf366e32e11a0e5ceb9654596ef9e6aa2036bb9b1c279e1494126f5e6ac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6437
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank