Protein

View in Explore
Genbank accession
XJP14190.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKITANYGLKKPEGHDAVNIEDLNYNSDIVDKKINEIEAKAEKAFTHASNGKKFIRDAIAGKDKNIIIPSDPTFEDLANSIRQMSIGAKMYAGKSIVEDFGIIRGEGFDFKPEIIFFTRVSKDGDRWFNYVYWRWNSEFFVRSVGGNSSMGKIYTYPTWFEVKVSSDIAQVGSEFEWLAIGKDPEGYGRYNE
Physico‐chemical
properties
protein length:192 AA
molecular weight: 21869,32980 Da
isoelectric point:5,57059
aromaticity:0,14062
hydropathy:-0,50260

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage Makh22
[NCBI] 		3367538 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium sp.
[NCBI] 		1506 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XJP14190.1 [NCBI]
Genbank nucleotide accession
PQ069209.1 [NCBI]
CDS location
range 15003 -> 15581
strand +
CDS
ATGAAAATAACAGCTAATTATGGACTTAAAAAGCCAGAAGGTCATGATGCAGTGAATATAGAAGATTTAAATTATAATTCAGATATAGTGGATAAAAAAATAAATGAGATTGAAGCTAAAGCAGAAAAGGCTTTTACACATGCCAGTAATGGGAAGAAATTCATAAGGGATGCTATTGCTGGCAAAGATAAAAATATAATAATCCCTTCTGATCCAACCTTTGAAGACTTAGCTAATAGCATAAGACAAATGAGTATAGGTGCCAAAATGTATGCGGGGAAATCAATTGTAGAAGATTTTGGTATTATACGTGGTGAAGGGTTTGATTTTAAACCCGAAATAATATTTTTTACTCGGGTTTCCAAGGATGGGGATAGGTGGTTTAATTATGTCTATTGGAGATGGAATAGCGAATTCTTTGTGCGTTCGGTTGGTGGCAATAGTTCAATGGGTAAAATATATACCTATCCAACTTGGTTTGAAGTTAAAGTAAGCTCAGATATAGCACAGGTTGGAAGTGAATTTGAATGGTTAGCTATAGGAAAAGATCCAGAGGGGTATGGTAGATATAATGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f59243561eb5ccd15272b0f1ab13619ad4969a335667f83e646df8ae06807295
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8291
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequence-independent single-primer amplification and Oxford Nanopore MinION sequencing decipher the viral genomic diversity in South African domestic chickens Chauhan,R.P., Fogel,R. and Limson,J. 2023-11-18 — GenBank