Protein

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Genbank accession
QKE54492.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSDLLNNAFKTTGTLAASLKPILPSSNDTIRIWDIRNIYKGPTFIQENGYYAYVPKEGDWVIDRDNGWFYVAHVGLEGENLSTLVPWEAPSRGGTADDDLILLGDISRYTSEFILCAIDYSQMPPVMTVDNRIQVYGSNAVSAKIFLHNDIGVNGQVVSCQYDNSGNIVSDTVPLELVKFNESRNIAVRVPLPCHCSQNLADGETLTFVAYDKNGGPILPAYRLVVQNTAFVRRTELGQKYVKGVQLLSPFLNSNDPELLEIPVSIRSLASVEFRARVWYSDNSYKDWAVDGDRMVLNGVREYIPTIVGQQASLTLTYFLNDNEQAVTSNPGEKPHVDQNYRIRTTEAIGAYAPKLYGYPVWDAAKATWKMAMWLYNLDRQMAYEVTGKVELGVNSEPFDPKNYGVVQHLTYAITLASVDSRWKAYRHVQNLDVVIYGAPGSATGTDWTVGFDPGQEPVYGPNLSCKITGTSANARTVKIDSGIKTYNEWLEQMFYNTRPLRAIASESKAPAPTHFEVYVDAGHVYRYPVSQWNAALTIGTVLTAGQNVFIKWLKTDAGNVELQLGISALVVKL
Physico‐chemical
properties
protein length:574 AA
molecular weight: 63856,38580 Da
isoelectric point:5,35016
aromaticity:0,10801
hydropathy:-0,19669

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKE54492.1
1 574
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,9603
Central domain 30 373 345 0,4347
C-terminal 374 574 200 0,4739
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-373
C-terminal
374-574

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalM_SA002
[NCBI] 		2739752 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Heidelberg
[NCBI] 		611 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKE54492.1 [NCBI]
Genbank nucleotide accession
MN445183 [NCBI]
CDS location
range 151779 -> 153503
strand +
CDS
ATGAGTGATTTACTAAATAATGCCTTTAAGACTACAGGGACGTTGGCGGCGTCGCTGAAGCCGATTCTCCCGTCGTCGAATGATACCATTCGCATTTGGGATATTCGTAACATCTATAAAGGCCCGACCTTCATCCAGGAGAACGGTTATTACGCCTACGTTCCCAAAGAAGGCGACTGGGTTATTGACCGTGACAATGGCTGGTTCTATGTTGCCCATGTTGGTCTGGAAGGGGAAAACCTTTCTACACTGGTCCCATGGGAAGCACCAAGTCGCGGTGGCACGGCTGATGATGATCTCATTCTGCTGGGCGATATTTCTCGTTACACCAGTGAGTTCATTCTCTGTGCTATCGACTATTCACAGATGCCGCCGGTAATGACGGTTGACAACCGCATTCAGGTCTACGGGTCTAATGCTGTGTCAGCGAAGATCTTCCTGCACAACGACATCGGTGTGAACGGGCAGGTCGTCAGCTGTCAGTATGACAACTCTGGCAACATCGTAAGCGATACTGTGCCGTTGGAGCTGGTCAAGTTCAACGAGTCTCGTAACATCGCAGTGCGTGTTCCACTGCCGTGCCACTGTTCACAGAACCTGGCTGATGGTGAAACCCTGACCTTTGTAGCGTATGATAAGAACGGTGGGCCAATTCTACCTGCTTATCGTCTGGTGGTTCAGAACACCGCCTTTGTGCGTCGTACTGAGCTGGGTCAGAAATACGTTAAAGGTGTTCAGCTGCTGTCCCCGTTCTTGAATAGCAACGACCCTGAACTGCTGGAGATTCCGGTCTCTATTCGCAGCCTGGCGTCTGTTGAATTCCGTGCTCGTGTCTGGTACAGCGATAACTCGTACAAAGACTGGGCCGTGGATGGCGATCGCATGGTGCTGAATGGTGTGCGCGAATACATCCCGACCATCGTGGGTCAACAGGCCAGTTTGACGTTAACGTATTTTCTGAACGATAACGAACAAGCTGTGACATCCAACCCGGGTGAAAAACCACACGTTGACCAGAACTACCGCATTCGCACCACCGAAGCGATTGGCGCGTACGCACCGAAACTGTACGGCTATCCGGTGTGGGATGCGGCGAAAGCCACGTGGAAGATGGCGATGTGGTTGTATAACCTTGACCGTCAAATGGCGTACGAGGTTACGGGTAAAGTGGAGCTGGGTGTGAACTCCGAACCATTTGATCCGAAGAACTATGGTGTAGTGCAGCACCTGACTTACGCTATAACGTTGGCAAGCGTGGATTCCCGTTGGAAAGCCTATCGTCATGTTCAGAACCTTGACGTGGTGATTTACGGCGCCCCGGGGTCTGCCACAGGTACTGACTGGACTGTAGGCTTTGACCCTGGTCAGGAACCAGTGTACGGTCCTAATCTGTCCTGTAAGATCACCGGTACTTCGGCTAACGCCCGTACCGTTAAGATCGACTCTGGCATTAAGACCTACAACGAATGGCTTGAGCAGATGTTCTATAACACTCGACCGCTGCGTGCGATTGCTTCCGAGTCAAAAGCACCGGCCCCAACCCACTTCGAAGTGTACGTGGATGCCGGCCATGTCTATCGTTACCCTGTCAGTCAGTGGAATGCTGCATTGACAATCGGTACCGTGTTGACCGCCGGACAAAACGTCTTCATCAAGTGGCTGAAGACCGATGCTGGTAACGTTGAGTTACAGCTGGGTATCTCTGCGTTGGTGGTCAAGCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ab838e39317f0eb1d393665bc4689313625f171b8c5c65dba3884f70fb470cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4225
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50