Protein

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Genbank accession
ATG86238.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTDITLQNITSGYNVTKINYNFDVIEQSINEDILHLKGGNNTMLQDLDMNSYALLNVKTDVTNPDSLLTVADGDVRYYNITGDTLEGTFNAGQQRMTNLRKAAAPTEAVRKQELDEEAAARAAGDASLQEQLNGTNPPMGSAFSVISWHGQHVTNSIDIPDNVNAWSFGPTMTIDAGQVVTIGDNSFWTIANGEVQP
Physico‐chemical
properties
protein length:197 AA
molecular weight: 21410,34430 Da
isoelectric point:4,23709
aromaticity:0,06599
hydropathy:-0,37462

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage IME180
[NCBI] 		2041348 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATG86238.1 [NCBI]
Genbank nucleotide accession
MF788075 [NCBI]
CDS location
range 271 -> 864
strand +
CDS
ATGACCGACATAACGTTACAGAACATTACGTCTGGTTACAATGTCACGAAGATTAATTATAACTTCGATGTTATTGAACAAAGTATTAATGAGGACATTCTACACTTGAAGGGTGGTAACAACACTATGCTTCAAGACTTGGATATGAACTCTTATGCTTTGCTTAATGTTAAGACAGATGTAACCAATCCGGATAGTCTCCTTACTGTTGCTGATGGTGATGTACGCTATTACAACATTACGGGAGACACCCTGGAAGGAACTTTTAACGCTGGTCAACAGCGTATGACTAATTTGCGTAAGGCAGCAGCTCCTACTGAAGCAGTACGTAAACAAGAGCTTGATGAAGAAGCTGCTGCTAGAGCAGCCGGTGATGCTTCTTTACAAGAACAACTTAATGGAACCAATCCGCCGATGGGCAGTGCTTTCTCAGTTATTAGTTGGCACGGACAACATGTAACAAATAGTATTGACATACCAGACAATGTTAACGCTTGGTCCTTTGGGCCTACGATGACTATTGATGCAGGTCAAGTAGTTACTATTGGCGACAATTCGTTCTGGACCATTGCTAACGGAGAAGTACAACCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4af1b2b6a2ddaf49454c5b83d14942e32a12595a6f90b1d95ade3e3e6010a12
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7811
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological characterization,whole genomic sequence analysis and assisted serum bactericidal action in vitro by encoded deploymerase of a novel Pseudomonas aeruginosa lytic bacteriophage IME180 Mi,L. and He,T. 2019-04-01 — GenBank