Protein

View in Explore
Genbank accession
WPK34198.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAVEGPWVGWSARVQTGDPWMGGAAQRLRMGIPFWMSNMIGRSVEIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGDLVSYNRDVPLFFMNGDTPNEYVTLNIHGGVHMWGRGGQGGWTHSGGDGNGQWGGDCIVNHIGTRLRIWNYGVICGGGGGGGGIAYRPHSGANWQDIGGGGGRPFGPGGGGGYSGGGASYEGPGGGYNYGNAHSGHGGDAGGAGQNAWQDGGKALKVGAGGGSGAAVAVSSPMWGATGTIYGPWL
Physico‐chemical
properties
protein length:264 AA
molecular weight: 27013,44450 Da
isoelectric point:6,48137
aromaticity:0,11364
hydropathy:-0,30871

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_2135
STR
1–141
DC_2135
WPK34198.1
1 264
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-141 | RBD 142-264
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV111
[NCBI] 		3077256 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK34198.1 [NCBI]
Genbank nucleotide accession
OR352941.1 [NCBI]
CDS location
range 62338 -> 63132
strand +
CDS
ATGGCAGTTGAAGGACCGTGGGTTGGATGGTCTGCGAGGGTACAAACTGGAGATCCTTGGATGGGTGGTGCTGCGCAGAGATTGAGAATGGGAATTCCGTTTTGGATGAGTAATATGATAGGTCGATCTGTTGAAATAATTCACACGCTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCGCCTATAGTGTTTAATATTACAGGTGATTTAGTGTCTTATAACAGGGACGTCCCGTTATTCTTTATGAATGGAGATACGCCTAATGAATACGTTACTTTGAATATTCACGGCGGAGTTCACATGTGGGGCCGCGGTGGCCAAGGTGGTTGGACACACTCAGGCGGTGACGGTAACGGGCAATGGGGCGGTGATTGTATTGTTAACCATATAGGCACCCGTTTACGTATATGGAACTACGGTGTTATCTGTGGCGGCGGTGGCGGCGGCGGTGGTATCGCTTATCGTCCTCACTCTGGTGCTAACTGGCAGGATATTGGCGGTGGCGGCGGAAGACCATTTGGCCCAGGAGGTGGAGGTGGCTATTCTGGTGGTGGAGCTTCTTATGAAGGCCCGGGTGGTGGATATAACTACGGTAACGCTCACTCTGGGCATGGTGGCGATGCAGGCGGCGCAGGTCAAAACGCCTGGCAAGATGGCGGGAAAGCGCTTAAAGTAGGAGCAGGTGGCGGTTCTGGTGCAGCTGTTGCAGTGTCATCCCCGATGTGGGGAGCAACAGGTACTATCTATGGCCCATGGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8b9a334faddda6f8e85a151fc700cebc81862931bfbceac321f523037aeaf26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6997
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank