Protein

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Genbank accession
URG13112.1 [GenBank]
Protein name
putative structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MSKIEVDAIDKQSGSTLTLGGSGTAVTLASGATQSGFGRTGTVNWVTTKKTTGFTAVSGEGYFCDTAASGAFTLTLPASPSAGDIVGLKDYNGNFATANLTIGRNSQPINGGNAADVVINTAGASIFLVYVDATQGWVATQDDESVFTGVSFICASVSGSGNTLVTAPDCANAKIATFTGPGNFTVNSVANCAANNLVSYLVVAGGGGAGGDLAGGAGAGGFRETKSPVTPYTASPLDGYSTPGNRITVTAQAYGITVGGGGAAGAGPTITEGCRGSNSTFSTITSTGGGAGMVRTAQQSGPPAPAKSPGGSGGGGSYNNSAAGTGNTPPVTPPQGNNGGATPGGTDAGGGGGGGATAAGGAGAGPSSAQGPGGAGATTNINSSPTTFAGGGGGGGWSAPSAGGSGGAGGGGAGGDPGSGPGPESGTAGTANTGGGGGGAHASASAVGGAGGSGIVIIRYKFQ
Physico‐chemical
properties
protein length:463 AA
molecular weight: 42681,57840 Da
isoelectric point:4,94178
aromaticity:0,05616
hydropathy:-0,05767

Domains

Domains [InterPro]
DC_1946
ATT
6–461
DC_1946
IPR049304
STR
181–461
IPR049304
URG13112.1
1 463
Architecture
ATT
ATT 6-461 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage phage 023Pt_psg01
[NCBI] 		2945965 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13112.1 [NCBI]
Genbank nucleotide accession
MW574966 [NCBI]
CDS location
range 37471 -> 38862
strand +
CDS
ATGTCAAAAATAGAAGTAGATGCAATTGATAAACAAAGTGGTTCAACCTTAACTTTAGGTGGTTCTGGTACAGCTGTAACTTTAGCTAGTGGCGCTACTCAATCAGGTTTCGGTAGAACAGGTACAGTAAATTGGGTTACAACAAAAAAGACAACAGGGTTTACTGCAGTATCAGGAGAAGGATATTTTTGTGATACAGCGGCAAGTGGAGCATTTACTTTAACACTTCCAGCTTCTCCAAGTGCAGGAGATATTGTGGGACTCAAAGATTATAATGGAAATTTTGCAACAGCGAATTTAACAATTGGTAGAAATAGTCAACCTATAAATGGAGGAAATGCTGCTGATGTTGTTATAAATACTGCGGGTGCTTCAATATTTTTAGTTTATGTAGATGCAACTCAAGGATGGGTTGCTACACAAGATGATGAATCAGTTTTTACAGGAGTATCATTTATTTGTGCGTCAGTTTCAGGATCGGGTAATACTTTAGTAACTGCTCCTGATTGTGCAAATGCAAAAATTGCAACTTTTACAGGCCCAGGAAATTTTACAGTTAATTCTGTAGCTAATTGTGCTGCTAATAATTTAGTTTCATATTTAGTAGTAGCAGGTGGTGGTGGTGCTGGTGGAGATTTAGCGGGCGGTGCTGGAGCAGGAGGTTTTAGAGAAACAAAATCTCCAGTTACACCTTATACAGCTAGTCCATTAGATGGTTATTCAACTCCAGGAAATAGGATTACAGTTACAGCACAAGCATATGGAATAACAGTTGGTGGTGGAGGCGCTGCAGGAGCTGGTCCAACTATTACAGAGGGTTGTAGAGGGTCTAATTCAACTTTTTCAACAATTACGTCAACAGGTGGTGGTGCAGGTATGGTAAGAACAGCTCAACAAAGTGGACCCCCTGCTCCAGCAAAAAGTCCAGGTGGATCAGGTGGAGGAGGTTCTTATAATAATAGTGCTGCCGGAACAGGTAATACTCCCCCGGTAACCCCACCTCAAGGAAATAACGGTGGAGCTACTCCAGGAGGCACTGATGCTGGTGGCGGTGGTGGGGGCGGTGCAACAGCCGCAGGAGGCGCTGGTGCTGGTCCATCTTCTGCTCAAGGACCCGGAGGTGCAGGAGCAACAACAAATATTAATAGTTCACCAACAACTTTTGCTGGTGGCGGTGGAGGCGGCGGTTGGAGTGCTCCAAGTGCTGGTGGTTCTGGTGGTGCTGGTGGAGGAGGTGCTGGTGGAGATCCAGGTTCTGGACCAGGTCCAGAAAGTGGAACAGCAGGAACAGCTAACACTGGAGGTGGTGGTGGCGGTGCACACGCTAGTGCTAGTGCAGTAGGTGGCGCAGGCGGTTCAGGTATAGTAATAATAAGGTACAAATTTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5cc52cdc26c088684daa1ee87c7efd762b345a992c203e62c043144ec541f9d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7890
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Global distribution of Type-VIII Secretion System operons transferred between Myo and Podoviruses of the dominant marine bacterium SAR11 Wittmers,F., Needham,D.M., Hehenberger,E., Giovannoni,S.J. and Worden,A.Z. 2011-12 — GenBank