Protein

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Genbank accession
XUQ12060.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRLLFTKDDQGNIIDLGFAKGGSIDGNVIHTGNYNQTGDYTLNGTFTQTGNFNLTGIARVTRDIIAAGQITTEGGEFITKSSGTAHVRFHDSADRERGIIFSPANDGLTTQVVNIRVQDYKASSENTFAFNGNGLFSSPEVFGWKSVSTPVIYTNKVITNKKVKDDYDIYSMADNVPLSESTTAINHLRVMRNAVGAGVFHEVKDNDGITWYTGDGLDTYLWSFTWSGGLKAGHSISVGTPGGNKGYSELGTASISLGDNDTGLKWHQDGYFFTVNNGTKTFLSGPAETTSLRKMVMGYSVNGTDLTTPPTENYALATVVTYHDNNAFGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGDINVIGGSVNIDGRNNASTLLFRGNTTGTSSVDNMTISVWGNTFTNPSEGTRKNVMEISDATSWMSYIQRLTTGEVEMNVNGSFESSGVTAGDRGVHTTGEISSGAVNALRIWNADYGAIFRRSEESLHIIPTAYGEGKDGDIGPLRPFSMALDTGKVTIPDLQSKYNTITANGYIKFVGHGAGAGGYDIQYAQAAPIFQEIDDDAVSKYYPIVKQKFLNGKSVWSLGTEINSGTFVLHHIKEDGSQGHTSRFNQDGTVNFPDNVQVGGGEATIARNGNIWSDIWKTFTSAGDTTNIRDAIATRVSKEGDTMTGRLTLKTNSDAVVIDYPADEAGYIKGKKGGADNWYVGNGGADNGLAFWSFQSQGGININPNGEVILAPQGVAIVNINRDRIHMNGSNWIAHKSGAWGDQWGLEAPYFLDFGSVGEDSYYPIIKGRSLISGQGYTTSVELGMRRTPQTWGQAIIRVGNAEGADGPVGVFEFHSDGRFYSPTLVQTPAIGVGTVNGLGSPSIAIGDNDTGLVHGGDGRINMVADGAHIASWSSSHHEHTGLWSTDGAFWTEVGKAIISHGHLVQQGDAYSTFVRDVYVRSDIRVKKDLVKFENASEKLSKINGYTYMQKRGLDEEGNQKWEPNAGLIAQEVQAILPELVEGDQDSEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKALVKSLLK
Physico‐chemical
properties
protein length:1101 AA
molecular weight: 118548,81790 Da
isoelectric point:5,44219
aromaticity:0,09173
hydropathy:-0,35604

Domains

Domains [InterPro]
DC_0538
STR
1–683
DC_0538 G3DSA:6.20.80.10 DC_0133
IPR048390
ATT
449–549
IPR048390 DC_0339 Coil
IPR030392
CHP
991–1050
IPR030392
IPR030392
CHP
991–1089
IPR030392
XUQ12060.1
1 1101
Architecture
STR
ATT
STR
RBD
STR 1-448 | ATT 449-549 | STR 550-1018 | RBD 1019-1101
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUQ12060.1
1 1101
Domain Start End Length (AA) Confidence
N-terminal 1 458 458 0,0980
Central domain 459 657 200 0,2116
C-terminal 658 1101 443 0,8322
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-458
Central
459-657
C-terminal
658-1101

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LF82-4
[NCBI] 		3433670 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli LF82
[NCBI] 		591946 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUQ12060.1 [NCBI]
Genbank nucleotide accession
PV660448 [NCBI]
CDS location
range 59633 -> 62938
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGAGCACGTCCTGCCGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGACCGTTTACTTTTTACTAAAGATGACCAAGGAAATATCATTGATCTTGGTTTTGCTAAGGGTGGTAGTATTGACGGGAATGTTATTCATACTGGCAATTATAACCAAACTGGCGATTATACTTTAAATGGTACCTTCACTCAGACTGGTAATTTTAATTTAACTGGTATTGCTCGAGTAACTCGCGATATTATTGCTGCTGGGCAGATTACGACTGAAGGCGGAGAATTTATTACAAAAAGTTCAGGTACAGCACATGTTCGTTTTCATGATTCCGCCGACCGTGAACGCGGTATTATTTTTTCTCCTGCTAATGACGGTTTAACTACACAAGTAGTTAACATCAGAGTTCAAGATTACAAAGCTAGTTCAGAAAACACTTTCGCTTTTAATGGAAATGGTTTGTTTTCTTCACCAGAAGTTTTTGGGTGGAAATCCGTATCAACTCCGGTAATTTATACCAATAAAGTTATCACCAATAAAAAAGTTAAAGATGATTATGACATCTATTCGATGGCAGACAATGTTCCATTGTCTGAAAGCACTACTGCTATTAATCATCTCCGTGTTATGCGCAATGCTGTAGGCGCTGGTGTATTCCATGAAGTTAAAGATAATGATGGAATAACTTGGTATACTGGAGATGGCTTAGACACTTATCTTTGGTCGTTTACCTGGTCCGGTGGATTGAAAGCAGGCCATTCTATTTCTGTTGGTACTCCTGGTGGCAATAAAGGATACTCTGAATTAGGGACTGCTTCAATTTCTCTTGGCGATAATGATACCGGGCTAAAATGGCACCAGGATGGATATTTTTTTACGGTAAACAACGGTACAAAAACTTTCCTTTCTGGTCCGGCGGAAACCACTAGCCTTAGAAAAATGGTTATGGGTTATTCTGTAAATGGCACTGATTTGACTACTCCTCCAACTGAAAATTATGCTCTTGCAACTGTTGTTACTTACCATGATAATAACGCGTTTGGAGATGGTCAGACTCTTTTAGGATATTATCAAGGCGGTAACTATCATCATTATTTCCGCGGCAAGGGTACTACAAACATTAATACTCATGGCGGTTTGTTAGTTACTCCAGGTGATATTAATGTTATCGGTGGTTCTGTTAATATCGATGGTAGAAATAATGCTTCTACATTGTTGTTTAGAGGTAACACAACTGGTACCAGTTCAGTTGATAATATGACAATTTCTGTATGGGGTAATACCTTTACTAATCCTAGCGAAGGCACCCGTAAAAATGTCATGGAAATTTCTGACGCAACTAGTTGGATGAGCTATATTCAAAGACTTACTACTGGCGAAGTAGAAATGAACGTTAATGGTTCATTTGAATCATCTGGTGTTACTGCTGGAGATAGAGGAGTTCACACAACAGGTGAAATTTCATCTGGAGCAGTGAATGCTCTTCGTATTTGGAACGCAGATTATGGAGCCATTTTTAGACGTTCAGAAGAAAGTCTTCATATTATTCCAACTGCTTATGGCGAAGGCAAAGATGGCGATATCGGTCCACTTCGCCCGTTTAGTATGGCTTTAGATACTGGTAAAGTTACTATTCCAGATTTACAATCAAAATACAATACGATCACTGCGAACGGCTATATTAAATTTGTTGGTCATGGCGCTGGCGCAGGTGGATATGATATTCAATATGCCCAAGCGGCTCCTATTTTCCAGGAAATTGATGATGATGCTGTAAGCAAATATTATCCTATTGTTAAACAGAAGTTTTTAAACGGTAAATCCGTTTGGTCTTTAGGTACTGAAATTAATTCGGGTACATTTGTTTTACACCATATCAAAGAAGATGGATCACAAGGACATACATCTCGTTTTAATCAAGACGGTACTGTTAACTTCCCTGATAATGTTCAGGTTGGTGGTGGTGAAGCTACTATTGCTCGCAACGGTAACATCTGGTCTGATATCTGGAAAACGTTTACTTCAGCAGGAGACACTACAAATATTCGCGATGCAATAGCTACTCGTGTTTCTAAAGAAGGCGACACGATGACAGGTCGTTTAACTCTTAAAACCAACTCAGATGCTGTTGTTATTGATTATCCGGCAGATGAAGCGGGCTATATTAAGGGTAAAAAAGGTGGTGCTGATAACTGGTATGTCGGTAACGGTGGTGCTGATAACGGTTTAGCTTTCTGGAGCTTCCAATCCCAAGGTGGTATTAATATCAACCCGAACGGTGAAGTTATTCTGGCGCCGCAAGGTGTTGCAATAGTCAATATAAACCGCGACCGTATTCATATGAATGGTTCCAACTGGATTGCACATAAATCTGGTGCGTGGGGCGACCAATGGGGCTTAGAAGCACCTTATTTCCTTGATTTTGGTAGCGTTGGCGAAGACAGTTATTATCCCATTATTAAAGGCCGATCTTTAATTAGTGGTCAGGGTTATACTACTTCTGTTGAATTAGGCATGCGTCGTACTCCACAAACATGGGGACAAGCGATAATTCGAGTTGGTAATGCCGAAGGCGCTGACGGTCCTGTGGGTGTTTTTGAATTCCATTCTGACGGTAGATTTTACTCCCCGACTTTAGTCCAGACTCCTGCAATTGGTGTCGGTACTGTTAATGGATTAGGCTCTCCTAGTATTGCTATTGGTGATAATGATACTGGATTAGTTCATGGCGGTGATGGACGAATTAACATGGTTGCCGATGGTGCACATATTGCTTCATGGTCTTCATCCCATCATGAACACACTGGGCTTTGGAGCACCGACGGCGCGTTTTGGACAGAAGTTGGCAAAGCAATTATTTCTCATGGCCATTTAGTCCAACAAGGTGATGCCTATTCCACATTTGTCCGCGATGTTTATGTCCGCTCTGATATTCGTGTTAAAAAGGACCTAGTTAAATTTGAAAATGCTTCTGAGAAGCTTTCAAAAATTAATGGTTACACTTATATGCAGAAGCGAGGCCTAGATGAAGAAGGTAATCAGAAATGGGAACCAAACGCTGGATTAATTGCTCAAGAAGTTCAAGCTATTTTACCTGAATTGGTTGAAGGCGATCAGGATAGTGAAGCTTTACTTCGTTTGAACTATAACGGTGTAATTGGTTTAAATACAGCTGCAATCAATGAGCATACTGCAGAAATTGCGGAACTTAAATCAGAAATTGAAGAACTTAAAGCATTAGTTAAATCATTGTTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2777b3db498b7bbaebd4086db28cfb5de26fc5bee14c52bfae8e5a5c4604be2b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7001
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Novel Phages Infecting Escherichia coli LF82 Steczynska,J.P. and Williams,K.P. 2025-10-09 — GenBank