Protein

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Genbank accession

WMU95137.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MKKNKLLQRGSLFGNKEFKIEEFNKNFDTFNVKDIFTDMDSGSVFIIKDDLKLYAAGYNVFGNLGLGNKVSPIRYFSKIDIDNVKYVSSSGTHSLLLKNNGDVYSTGLNTDGELGLGDNIDRNTFTKINISNVKQIACGNGYSMLVTNDNELYVCGNNKFGGIGLGNTSTVNTFTKIDNLSVKEIFAGVSCSYILTLNNEVYSTGTNSYGQLGLNDTTNRNIFTKVNLDNVIKISTAQGAVNFLLENGDVYGCGDNSSGQVGVGGGATVTVLTKLSISNVKNIESGRYHKFYIANNNDIYVTGANPDGRLGDKINCDTSTYTPRKSSISIKNISKIKCAHAISFILTSNNELYMTGDNNYSFSYLKRYDKFIYGFEKFEDFDIEECNHIESIDNRLLINKNDERVLDIGLENNFVNISLVKANDTSTFIVVNGNELYAAGYNAYGGLGLGHNRHCYEFTRVPLELEEGVTIKDIYLNLGSYFTFILLSDNTLYSTGYNVFGVLGLGDNINRNTFTKVNISSVDKISVGDNHALLKTTTNELFSTGLNNYGQLGLNDNTNRNIFTKVSTVTYVNEIIAYSNSSYCIDNSRISYAAGYNVFGELSLNDTSSRSVFVKMKYLRYKTDTTVSDVSNIAEIIPFNNGCLIRTTSNNYYVSGRHNYYSTSIKNSVTDDYYSRFGEFVGSKNSNANEVAVLIDEPKLSKVLVSNYNLCLLLDASDGGYKEIKFTGRPSTFGASSQDKNLGLRSLISSSMPYYNHYLGTDNLLYTTSKTRMESKFEIRGRNAGGQRGDSSYYSNSQKYTLSNAFFAYNSQVIYASRLRIVIKDYFGNIYCSGVNSHGCFGIKKPYDVRHDGFVNISKQFSKKYIISNIKEIKSDRQALYILLNNSEGYVCGNNAGNKLGTIKARSEFIKVPIDNIKEFIPSNDCLFILTNNNQVYSIGTNDLGQLGLGDNIDRGTFTKVPIDNVKKVITCYKSSYILTYDNELFSTGSNGYGQLGLGDNINRNTFTKVNISGTIKDIFCGRYVFIILLENDNIISLMGCGNRNYISSNTNSNSLTKINIEGLTDPSTISNLMLEEGKTIITMKNRIFVTGYNSLGGLGVGTSYNNSSGYIEGYKDLAFNSNIKEVALGEYTIFVLLENGDLYSGGNADDGIGFNESGTVVLKKLTSNIKHIYANGKNAYYIDNDNALYVFGSRQLGQINNYSDVVQKTPVRNCLNVKQVYTQHNGLIVQYTNNKLEGKGNAVVGQVGIFNGHEENQIANTSGDNPSDLSFSNEMSIIRNNYGLLVNKKIFLHNDDSINYRIPFGTNAGNYSTSLPFDNIKKMSLSSTHSILILENGDVYGCGSNQFGELAINKSELTTTSEFIKINLTNIIDIACGDNFTYFLKNDGSLFSIGKNSEYQLGIGHNDEVNELQEVLTISNIREIYAYSNYILAITTEGQLYVQGYNINGILGLNENTKNTIIKLFTKVLENVKYIKSYDDKHIFVIKNDKTLYVTGINKETYKIKDVEIGSMLYTFSQIYIPRDVNDIVDALIKDETLYIISKVDSEKTCLEIKNKSYSSIEIDLQNPNNELTKIEMFINNISSSIIEDLSTGTVTFEINPENLVLGENKIVFKAHSDIGNNLYINVYIYKKETGATIVKDSTVLIDGNTYNVSSIVDNSQDVVLTLNKGLLEDLNSNNPIYHLVNKLKVQLKINESDTFKDMVKVETRKTENGYKEIYELKDMNIQSAQPKVIVEEGNTNTTIKKPSMLFNLDVETL

Physico‐chemical properties

protein length:	1759 AA
molecular weight:	195729,36840 Da
isoelectric point:	5,77089
aromaticity:	0,10290
hydropathy:	-0,29960

Domains

Domains [InterPro]

IPR009091
STR
11–180

IPR009091 IPR009091 IPR009091 IPR009091 IPR009091 IPR009091 DC_1828

IPR009091
STR
45–361

IPR009091 IPR009091 DC_1898 IPR009091 IPR009091 IPR009091

IPR000408
STR
51–100

IPR000408 IPR000408 IPR000408 IPR000408 IPR000408 IPR000408 IPR000408 PF13540 IPR000408 PF13540 PF13540

IPR000408
STR
101–149

IPR000408 IPR000408 IPR000408 IPR000408

IPR051553
Unmapped
129–360

IPR051553

WMU95137.1

1 1759

Architecture

STR

RBD

STR 11-368 | STR 385-1074 | STR 1080-1519 | RBD 1521-1759

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR009091	STR	IPR009091	11	180	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	45	361	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR000408	STR	DC_0062	51	100	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR000408	STR	DC_0062	100	146	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR000408	STR	DC_0062	101	149	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR051553	Unmapped	-	129	360	InterPro	Ran GTPase-activating	-	-	-	-
IPR000408	STR	DC_0062	151	167	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR009091	STR	IPR009091	181	368	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR000408	STR	DC_0062	201	217	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR000408	STR	DC_0062	248	296	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR000408	STR	DC_0062	283	299	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR000408	STR	DC_0062	299	313	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR009091	STR	IPR009091	385	733	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	412	674	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR000408	STR	DC_0062	485	506	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
PF13540	STR	DC_0403	522	551	InterPro cluster	Regulator of chromosome condensation (RCC1) repeat	Central	Low	Positional only	6 proteins / 8 hits
DC_1898	STR	DC_1898	722	778	Novel HMM	DC_1898	Central	Low	Positional only	3 proteins / 3 hits
IPR009091	STR	IPR009091	779	1062	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	855	1074	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR000408	STR	DC_0062	982	1024	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR000408	STR	DC_0062	983	1032	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
IPR009091	STR	IPR009091	1080	1281	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	1081	1254	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	1282	1519	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	1317	1500	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
PF13540	STR	DC_0403	1321	1349	InterPro cluster	Regulator of chromosome condensation (RCC1) repeat	Central	Low	Positional only	6 proteins / 8 hits
IPR000408	STR	DC_0062	1338	1388	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits
PF13540	STR	DC_0403	1372	1401	InterPro cluster	Regulator of chromosome condensation (RCC1) repeat	Central	Low	Positional only	6 proteins / 8 hits
DC_1828	RBD	DC_1828	1521	1759	Novel HMM	DC_1828	C-terminal	Low	Positional only	4 proteins / 4 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

WMU95137.1

1 1759

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	29	29	0,5975
Central domain	30	228	200	0,5646
C-terminal	229	1759	1530	0,4098

Note: Constraints were applied during segmentation.
Fixed 23 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-29

Central
30-228

C-terminal
229-1759

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Clostridioides phage AR1086-1 [NCBI]	3068253	No lineage information
Host	Clostridioides difficile [NCBI]	1496	cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Genbank protein accession

WMU95137.1 [NCBI]

Genbank nucleotide accession

OR397124 [NCBI]

CDS location

range 45697 -> 50976
strand +

CDS

ATGAAAAAGAATAAACTATTACAAAGAGGTTCTTTATTTGGAAACAAAGAATTTAAAATAGAAGAGTTTAATAAAAATTTTGATACTTTTAATGTTAAAGATATATTTACAGATATGGATTCTGGTTCTGTGTTTATAATTAAGGATGATTTAAAGTTATATGCAGCAGGATATAATGTTTTTGGCAATTTAGGACTTGGAAATAAAGTATCACCTATAAGATATTTTTCAAAAATAGATATTGACAATGTTAAGTATGTTTCATCTTCTGGAACTCATTCTCTTTTACTTAAAAATAACGGAGATGTGTATTCTACTGGCTTAAACACAGATGGGGAGTTAGGTTTGGGAGATAATATTGATAGAAATACTTTTACTAAGATAAATATAAGTAATGTAAAACAAATTGCTTGTGGGAATGGCTATTCTATGTTAGTTACAAATGACAACGAGCTTTATGTATGTGGTAATAATAAATTTGGAGGGATAGGCTTAGGAAATACATCTACTGTAAATACATTTACTAAAATTGATAATTTGAGTGTTAAAGAAATATTTGCAGGAGTCAGTTGTTCATATATATTAACTTTAAATAATGAAGTCTATTCAACAGGTACAAATTCCTATGGGCAGTTAGGACTTAATGACACTACTAATAGAAATATTTTTACTAAAGTAAATTTAGATAATGTAATAAAGATTTCTACTGCTCAAGGTGCTGTAAATTTTCTTTTAGAAAATGGGGATGTCTATGGTTGTGGAGATAATTCAAGTGGGCAAGTTGGTGTTGGTGGAGGAGCTACAGTAACAGTCTTAACAAAACTATCTATATCTAATGTAAAAAATATAGAAAGTGGTAGATATCATAAATTTTATATAGCTAATAATAATGATATATATGTAACTGGAGCCAACCCAGATGGGCGTTTAGGAGATAAAATAAATTGTGATACATCAACATATACTCCTAGAAAATCTTCTATTAGTATTAAAAATATAAGTAAAATTAAATGTGCTCATGCTATAAGCTTTATATTAACTAGCAACAATGAATTGTATATGACAGGAGATAACAATTATAGTTTTTCTTATTTAAAAAGATATGATAAATTTATATATGGATTTGAAAAATTTGAGGACTTTGATATTGAAGAATGTAATCATATTGAGTCTATTGATAATAGATTATTAATAAATAAAAATGATGAAAGAGTTTTAGATATAGGGCTTGAAAATAATTTTGTGAATATCTCTTTAGTGAAAGCAAATGACACCTCTACATTTATTGTTGTGAATGGTAATGAACTATACGCAGCAGGATACAACGCTTATGGAGGTTTAGGTTTAGGTCATAATCGTCATTGTTATGAGTTTACTAGAGTGCCATTGGAATTAGAAGAAGGAGTTACTATAAAAGATATATATTTAAATCTAGGCTCATATTTCACGTTTATATTACTAAGTGATAATACATTATATTCAACAGGATATAATGTATTTGGAGTGTTAGGATTAGGGGATAATATTAATAGAAATACTTTTACTAAAGTAAATATTTCTTCTGTTGACAAAATTTCTGTAGGAGATAACCATGCGTTATTAAAAACAACTACTAATGAATTATTTTCAACTGGTTTAAACAATTATGGGCAGTTAGGACTTAATGACAATACTAATAGAAATATTTTTACTAAAGTAAGTACTGTAACTTATGTAAATGAAATTATTGCATATTCAAATTCTTCATATTGCATAGACAATAGCAGAATATCTTATGCAGCAGGATATAATGTTTTTGGCGAATTAAGTCTTAATGATACCTCAAGTAGGAGCGTTTTTGTTAAGATGAAATATTTAAGATATAAAACAGATACAACAGTATCAGATGTATCTAACATTGCTGAAATTATTCCTTTTAATAATGGATGTTTAATTAGAACTACGTCTAATAACTACTATGTTTCTGGGAGACATAATTATTATAGCACAAGTATTAAAAATTCTGTAACTGATGATTATTATTCAAGGTTTGGAGAGTTTGTAGGAAGTAAAAACTCAAATGCAAATGAAGTCGCAGTTTTAATAGATGAACCTAAATTATCAAAAGTTCTGGTTTCTAACTATAATTTATGTTTATTATTAGATGCTAGTGATGGAGGATATAAAGAAATAAAATTCACAGGAAGACCTTCGACTTTTGGAGCTTCATCCCAAGACAAGAATTTAGGTTTAAGAAGTCTTATATCGTCTTCTATGCCTTATTATAATCATTATCTTGGAACAGACAATCTTTTATATACAACAAGTAAAACAAGGATGGAGTCTAAATTTGAAATAAGAGGTAGAAATGCAGGTGGGCAAAGAGGAGACAGTAGTTATTATTCTAATAGTCAAAAATACACATTATCAAATGCTTTTTTTGCATATAATTCACAAGTAATATATGCTAGTAGATTAAGGATAGTAATTAAAGATTATTTTGGGAACATATATTGTTCTGGAGTAAATTCTCATGGCTGTTTTGGCATAAAAAAACCTTATGATGTTAGACATGATGGTTTTGTAAATATATCAAAACAATTTTCTAAAAAATATATCATATCAAATATAAAAGAAATTAAAAGTGATAGACAAGCTTTATATATATTATTAAATAATAGCGAAGGATATGTCTGTGGTAATAATGCTGGTAACAAGTTAGGGACAATTAAAGCTCGGTCTGAATTTATAAAAGTTCCTATAGATAATATAAAAGAATTTATTCCATCGAATGATTGTTTATTTATTCTTACAAATAATAATCAAGTCTATTCAATTGGAACAAATGACTTAGGGCAATTAGGTTTAGGAGATAATATTGATAGGGGTACTTTTACTAAGGTGCCTATTGATAATGTAAAAAAAGTAATAACATGTTACAAATCTTCTTACATTCTAACCTATGACAATGAATTATTTTCAACTGGTTCAAATGGCTATGGTCAATTAGGATTAGGGGATAATATTAATAGAAATACTTTTACTAAAGTAAATATTTCTGGAACAATAAAGGATATATTTTGTGGAAGGTATGTTTTTATTATATTATTGGAGAATGATAATATAATTTCTTTAATGGGTTGTGGAAATAGAAATTACATAAGTTCAAATACAAATTCAAACAGTTTAACTAAAATAAATATTGAAGGATTAACAGACCCATCAACTATATCAAATTTAATGTTGGAAGAAGGCAAAACTATAATTACAATGAAAAATAGAATATTTGTCACAGGATATAACTCATTAGGAGGTTTAGGTGTTGGTACTTCATATAATAATTCATCAGGATATATTGAAGGATATAAGGATTTAGCGTTTAATAGTAATATAAAAGAGGTTGCTCTAGGAGAATACACTATTTTTGTTTTACTTGAAAATGGAGATTTATATTCTGGAGGAAATGCTGATGATGGTATAGGTTTTAATGAATCTGGTACTGTAGTATTAAAAAAATTAACAAGTAATATAAAGCACATATATGCAAATGGTAAAAATGCTTATTATATAGATAATGATAATGCCTTATATGTGTTTGGTAGTAGACAATTGGGTCAAATCAATAATTATTCTGATGTTGTACAAAAAACACCTGTTAGAAATTGCCTTAATGTAAAACAGGTATATACACAGCATAATGGTCTTATAGTTCAATATACTAATAATAAATTAGAAGGAAAAGGTAATGCTGTAGTTGGTCAAGTAGGTATTTTTAATGGACATGAAGAAAATCAGATTGCAAACACTTCTGGTGATAATCCTAGTGATTTAAGTTTTTCTAATGAAATGTCTATTATAAGAAATAATTATGGACTATTAGTAAATAAGAAGATATTTTTACATAATGATGATAGTATTAATTATAGAATACCATTTGGCACAAATGCTGGAAATTACTCAACTTCATTGCCTTTTGATAATATAAAAAAGATGTCTTTATCATCAACTCATTCAATTTTGATATTAGAAAATGGGGATGTCTATGGTTGTGGTTCAAATCAATTTGGGGAACTTGCTATAAATAAATCTGAGCTAACAACAACTTCTGAATTTATAAAAATTAACTTAACAAATATAATAGATATTGCTTGTGGTGATAATTTTACTTACTTCTTAAAAAATGATGGCTCATTGTTTTCTATTGGTAAAAACTCAGAATATCAACTTGGAATAGGGCATAATGATGAGGTTAATGAGTTACAAGAAGTATTAACTATTTCTAATATAAGGGAGATATATGCTTATAGTAATTATATATTGGCTATAACTACAGAAGGTCAATTATACGTACAAGGATATAATATAAATGGGATTTTAGGACTGAATGAGAATACAAAAAATACAATTATTAAATTATTTACTAAAGTATTAGAAAATGTAAAATATATAAAATCTTATGATGATAAACATATATTTGTTATAAAAAATGATAAGACTTTGTATGTTACAGGGATAAATAAGGAAACATATAAAATTAAAGATGTAGAGATTGGTTCTATGTTATATACTTTCTCACAAATATATATTCCAAGAGATGTTAATGATATAGTGGATGCTTTAATAAAAGATGAAACATTATATATAATCTCAAAAGTAGATTCAGAGAAAACTTGTTTGGAAATAAAGAATAAGTCATACTCATCTATTGAAATAGATTTGCAAAATCCAAATAATGAATTGACAAAAATAGAGATGTTTATAAATAATATTAGTTCAAGTATAATAGAAGACTTATCTACAGGAACAGTCACGTTTGAGATTAATCCAGAGAATTTAGTTCTTGGAGAAAATAAGATTGTATTTAAAGCACATTCTGACATTGGAAATAATTTATATATAAATGTTTATATTTATAAAAAAGAAACAGGAGCAACTATAGTAAAAGATTCAACTGTATTAATCGATGGGAATACTTATAATGTATCTAGTATAGTTGATAATTCACAAGATGTAGTACTTACACTCAATAAAGGTCTGTTAGAAGATTTAAATTCTAACAATCCAATTTATCATTTAGTAAATAAATTAAAAGTACAATTAAAGATAAATGAATCAGATACATTTAAAGATATGGTTAAAGTAGAGACAAGAAAAACTGAGAATGGATATAAGGAGATATATGAGTTAAAAGATATGAATATACAATCTGCACAACCTAAAGTAATAGTAGAAGAAGGAAACACTAATACAACTATAAAAAAACCATCTATGTTATTCAATTTAGATGTTGAAACACTTTAA

Genome Context

Tertiary structure

PDB ID

e5fd995bde79aeed6919f9a83a73a8c36db78602c35009f80d051fdb3a4a7903

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,6605

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Cdiff phage discovered during analysis of top 10 ribotypes AR-1086	Adamczyk,M., Gargis,A. and Vlachos,N.	2024-07-18	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature