Protein

View in Explore
Genbank accession
WYW00217.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAEAPKTTVTYPLDGANRDFLIPFEYLARKFVQVTLVGVDRKVLTLNIDYRFTQRTIVTTTKNWGPADGYNLIEVRRYTSATERLVDFSDGSILRAYDLNTSQVQSLHIAEEGRDIATDTIGVNNDGDLDARGRKIVNVADGTGDFDAVNLRQQKQWAGSALNQADRAQREADRATVQANASQASNAQSAAQAQESLKWANESSRHAGLSKASAEASQTSNVQSFQNLELARAQVAEATKQAGLATSNGAAQVQLATVQANRSRDEADRSTAQANASAGSAVTSKNEADRSTREADRAKTEADKLGNMNALASAIREVNVAGGKVEVGAGWEWNADVMAVDKFRSRSSASISFNAQLVGSLGASFTQRILTQADVQAGGEVAAGQTVRIRGTGANAHLWFMQPDGNENALIYAEPAGAMHFRSRSQGDTLTMNVDRSMDAGGNFRIAGASSTAGRHTAGELLSNSTVWSGGGASWLAGDGNVYGGAWGGYLSTWLGNQLAAKQPKHVFQCGRVDLGAPGGTGTPNYRINFHTPIADPVITLGLYVSGAFQSKWNMNINSIDNSGFTIFVQSMNSQNLVLHWMAANPTNV
Physico‐chemical
properties
protein length:589 AA
molecular weight: 62821,57940 Da
isoelectric point:6,28704
aromaticity:0,06961
hydropathy:-0,38761

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil Coil
DC_0657
STR
1–589
DC_0657
IPR011049
STR
115–153
IPR011049
WYW00217.1
1 589
Architecture
ATT
STR
ATT 1-131 | STR 132-589
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Keeri
[NCBI] 		3132629 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW00217.1 [NCBI]
Genbank nucleotide accession
PP496425.1 [NCBI]
CDS location
range 34620 -> 36389
strand +
CDS
ATGGCTGAAGCTCCAAAGACTACGGTAACGTATCCGCTCGACGGTGCGAACCGAGACTTTCTGATCCCCTTCGAGTACCTTGCGCGGAAGTTCGTGCAGGTCACCCTCGTGGGTGTGGACCGGAAGGTATTGACCCTCAACATCGACTATCGCTTCACCCAGCGTACCATCGTCACCACGACGAAGAACTGGGGTCCGGCTGATGGTTACAACCTGATCGAAGTACGCCGCTATACCTCTGCTACAGAGCGTCTGGTGGACTTCAGTGACGGTTCGATCCTCCGTGCGTATGACCTGAACACCTCTCAGGTTCAATCGCTGCACATCGCTGAAGAAGGCCGTGACATCGCGACCGACACTATCGGCGTGAACAACGATGGTGACCTTGATGCCCGTGGCCGTAAGATCGTGAACGTGGCTGACGGCACCGGTGACTTCGATGCGGTTAACCTGCGACAACAGAAGCAGTGGGCAGGCTCTGCGTTGAACCAAGCGGACCGGGCACAGCGTGAAGCTGACCGTGCAACCGTACAGGCCAATGCGTCCCAAGCGTCCAACGCGCAGTCGGCTGCTCAGGCTCAGGAGTCCCTTAAGTGGGCCAATGAGTCCTCTCGCCACGCTGGTCTCTCGAAGGCATCCGCTGAGGCGTCCCAAACGTCCAACGTACAGTCCTTTCAGAACCTTGAGCTGGCCCGTGCGCAAGTCGCCGAGGCTACCAAGCAGGCTGGCTTAGCGACCTCTAACGGTGCCGCTCAGGTCCAACTGGCGACCGTTCAGGCCAACCGTTCCCGTGACGAGGCAGATCGTTCGACCGCTCAGGCTAACGCTTCGGCTGGCTCTGCGGTGACCTCTAAGAACGAGGCTGATCGTTCCACTCGCGAAGCAGACCGTGCGAAGACTGAAGCTGACAAGCTCGGCAACATGAACGCGCTGGCCTCTGCAATTCGTGAAGTGAACGTGGCTGGCGGAAAGGTCGAGGTAGGCGCCGGGTGGGAATGGAACGCTGACGTTATGGCTGTGGACAAATTCCGCTCGCGAAGCTCGGCAAGTATCTCGTTCAACGCCCAGCTTGTAGGCTCTCTCGGTGCTTCGTTCACGCAACGTATCTTGACTCAGGCTGACGTTCAGGCTGGTGGCGAAGTCGCGGCAGGGCAGACTGTACGCATCCGAGGCACAGGGGCAAACGCTCACCTGTGGTTCATGCAGCCCGATGGTAACGAGAATGCTCTTATCTATGCTGAACCGGCAGGCGCTATGCACTTCCGCTCGCGCTCCCAAGGTGACACTCTTACCATGAACGTGGACCGCTCTATGGATGCTGGTGGTAACTTCCGCATCGCTGGTGCAAGTTCTACGGCTGGGCGACATACGGCTGGCGAACTATTGTCTAACTCGACTGTATGGTCCGGTGGTGGGGCGTCATGGCTGGCAGGTGATGGTAACGTCTACGGTGGTGCTTGGGGCGGTTACCTGTCCACATGGCTGGGTAACCAGCTCGCAGCTAAACAGCCAAAGCACGTATTCCAATGCGGTCGCGTTGACCTCGGGGCACCGGGTGGCACAGGCACGCCGAACTACCGAATCAATTTCCACACACCTATCGCAGACCCTGTGATCACGCTGGGCTTGTATGTCAGCGGTGCGTTCCAATCCAAGTGGAACATGAACATCAACAGTATTGATAACAGCGGCTTCACGATCTTCGTGCAGTCGATGAACTCGCAGAATCTGGTGCTGCACTGGATGGCGGCAAACCCAACCAACGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c11d3f19cd0fde2907a568efb79b84c1b09e41355b1fc1c78c32c71890314873
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7252
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank