Protein

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Genbank accession
XYS95934.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLNNLNQPKGSTIGVLRDGRTVQEAFDSLMYTEVLLKTGKENAESNRAALQAAADSTKLLAVPAGEYYLSSHVTLRTGNVIVGRGASAFSSGYTRLVCETPGEGIFWYTGDTSTGQKRMPQVYNMGLKGDYPIRFNDERTAIIADQAASNVPYGMVPVVQFCTIDPLTNGVGIGISASKMFDGVFSFNEIANFDTGVLLNGCDLMFVAHNRIRNAYRYMVLELGVGTFGSQNEIYHNDILHAGSTDCIFIKSTARHVRIYDNYLEQASGTSGQALIGFIDASAVDAPSFNGNAPAVRASTIIKDNRIDGQHFAKYFVYKYQPSSQTYGVIEDVSTVGPNTGLGANHLVLVDSSGNTVDRVPFLYNSVQTCSFRFSGPRFGKWNGYSSVSDFSLKLTGLNMSMWGTSLGGNSLKDYLSARGNSLILANGFTAAAVLQFPAGTLVRPSSQYAIKVTAKCSSGSETLTFAGVANGVGQTSVSMQLSTEPTSATTQFTSGSTQSGFSLGRSSNGADIEILAIEFIKLYSLEYSVVADTGATTVYRGSGDVVISASGNLQFPAYVVLRYIGGSLKEVYKSVTDAAVIDIAWSVSGQTLTVNITGSGGGKRFSVTQEEV
Physico‐chemical
properties
protein length:613 AA
molecular weight: 65375,60480 Da
isoelectric point:6,03360
aromaticity:0,09788
hydropathy:-0,02023

Domains

Domains [InterPro]
DC_0953
STR
1–393
DC_0953
IPR012334
STR
18–388
IPR012334
Coil
Unmapped
40–60
Coil DC_0556
IPR011050
STR
47–360
IPR011050
XYS95934.1
1 613
Architecture
STR
RBD
STR 1-393 | RBD 394-613
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYS95934.1
1 613
Domain Start End Length (AA) Confidence
N-terminal 1 43 43 0,9574
Central domain 44 382 340 0,9881
C-terminal 383 613 230 0,9879
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-43
Central
44-382
C-terminal
383-613

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage HMGUkp3
[NCBI] 		3434163 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS95934.1 [NCBI]
Genbank nucleotide accession
PV683290.1 [NCBI]
CDS location
range 13839 -> 15680
strand +
CDS
ATGTTAAACAATCTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACCGTCCAAGAGGCATTCGACTCACTGATGTACACAGAGGTCTTACTGAAGACTGGTAAGGAGAACGCTGAATCAAACAGGGCTGCCCTTCAGGCCGCAGCGGATTCCACTAAGTTACTGGCGGTACCAGCTGGTGAGTACTACCTATCGTCCCACGTAACCCTCCGCACTGGTAACGTCATAGTAGGACGCGGAGCCAGCGCATTCTCTTCAGGATACACACGGTTAGTGTGCGAGACTCCGGGTGAGGGCATATTCTGGTACACTGGCGACACCTCCACGGGGCAGAAGCGGATGCCTCAGGTGTACAACATGGGATTAAAGGGGGACTACCCGATTCGGTTCAATGATGAGCGTACGGCTATTATAGCAGACCAAGCTGCGTCTAACGTTCCGTATGGTATGGTTCCTGTCGTTCAGTTCTGTACAATCGACCCATTAACTAACGGTGTTGGGATTGGCATATCTGCGTCTAAAATGTTTGATGGTGTGTTCTCTTTCAACGAAATTGCTAACTTCGACACAGGCGTTCTCCTCAATGGGTGCGACCTCATGTTCGTTGCCCATAACCGCATCCGTAACGCCTACAGGTACATGGTGCTGGAGCTTGGCGTCGGGACATTCGGTTCTCAGAACGAGATTTATCACAACGACATTCTTCACGCTGGGTCTACAGATTGTATCTTCATCAAATCAACGGCTCGACACGTTCGTATCTACGACAATTATCTGGAGCAGGCTTCAGGCACGAGTGGTCAGGCTCTCATTGGATTCATTGACGCCTCGGCTGTCGATGCTCCGTCATTCAATGGGAACGCTCCGGCGGTTCGCGCCTCAACCATCATAAAGGACAACCGCATAGACGGGCAGCACTTCGCCAAGTATTTCGTGTACAAATATCAGCCGTCGAGTCAGACATACGGTGTTATCGAGGATGTGTCTACGGTGGGTCCGAACACTGGCCTTGGCGCAAACCACTTGGTACTTGTGGACTCCTCCGGTAACACGGTCGACAGAGTACCCTTCCTGTACAACTCAGTGCAGACATGCTCCTTCCGCTTCTCTGGCCCAAGGTTCGGTAAGTGGAACGGGTATAGCTCTGTGAGTGACTTCTCACTTAAACTGACTGGTCTGAACATGTCAATGTGGGGCACGTCGTTAGGTGGTAACAGCCTCAAGGACTACCTGTCTGCGCGGGGTAACTCGCTGATTCTGGCAAACGGCTTCACGGCAGCGGCTGTTCTACAGTTCCCGGCAGGTACATTGGTTCGGCCATCCTCGCAGTATGCCATCAAGGTTACCGCGAAGTGTTCGTCTGGAAGTGAGACACTGACGTTTGCTGGTGTTGCTAACGGTGTTGGTCAGACAAGCGTATCGATGCAGCTGAGCACTGAGCCAACGAGCGCCACAACCCAGTTCACCTCCGGCTCCACTCAGAGTGGTTTCTCACTGGGACGCTCCAGCAACGGTGCGGACATTGAGATACTGGCTATTGAGTTTATCAAGCTGTACTCTCTGGAATACTCAGTGGTTGCTGACACAGGCGCGACTACGGTATACCGTGGGTCTGGAGACGTGGTTATTTCAGCCTCTGGAAACCTGCAATTCCCGGCGTACGTAGTTCTTCGGTACATTGGCGGAAGCCTCAAGGAAGTGTATAAGAGCGTCACTGATGCTGCCGTTATTGACATTGCGTGGTCCGTATCTGGCCAGACCCTTACCGTGAACATTACGGGGAGTGGTGGTGGTAAGCGGTTCTCCGTCACACAGGAGGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
131c2318007d6ab8fb57ad2de3e693af467db06a9e587045061bfb5f9729ba79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6629
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50