Protein

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Genbank accession
VFR13140.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MKTYPYDPRGVNPHPSKMMTFNPKNTSGRTLIMCNYSYSSFRPVDTGKIPPAARFFTGVVDAGSTINEMNSAMNRYYATFLDYAINYSGLNRAFSSDTEVRLTYANLNTMPTNDLTKLITDPSTPIYHGVGGLQSTGESWTEDLSTRLRPDYIKTINFELTLTATTKTLKYTFFSHARTADGISFVGTINIDSGLNGVTGSGHDWTALNPSVRGVSTYAGIAVNYGRAAQVVMFMHRISVLVARTAGRITTPGTATADSVLETVIGCCHHSATVHNTFPMFQNNGITATWTPFPAADKWTFKTTSLSVTDYRFADWRYAQASSYTPMLKADYDTYGTGGPVWSTGAPGTKRIEHIEDDNAHIRRGMTQAEFGFVVFVEIRNVTRLGEFRELGENTAETETMTKIGSIITSETGFGVYVDAAGDAGKYIIYENPVPLSTFNLAELFPATHEDADYTDWMVTIKANDYFVGREYNSINIIRYGLPGTDIIENGITRQADAITEIEKVAKTVDSGAVQFGTAVDDATLALDGGEVIHTHTSAAFGIKRATTTEFGFVQLPISPLQQAELDKYAVVGSSIYIDKTNFGLSNVQNVPDQQFTGKLVAVKSYINDMPLTTEFGDREDLAATPALIKKLDCTFVPPESDDLGLMAVRLLAGTSTATVTINGNGIQSVPFIPTTVGPYLPGNESGGDGLFYQLILYPDSRGLEFNGKKLLERDSQTVNAGNNPITWQSGANESEGVGAQFTVDPRVIRFIGNGTFGMKPGLTSITSAVGTEPKLSTLANKLLRLPAAAQSIATLVYGKTQPQLTDYVNNLFPHRDSWGAIRALENNGIASEIVDKLYRDAPAHAHVPRKDKGAPAPDVNNDVYQLLVKYHQGVNLNWWAGENDYVQIRSLPSEFAPGYQKTDVAKWLKFKSITVKTSKQTVNYSFNVDNPPELAGEVEFSVVRREGNGVYEAIGSGSSNYSYTLTTGLTDTGASILRLQLKQRAIYLTLTTPETTLNPGELIDWMLCYANGQNTTFDAYSLAVKYRLPSIPYDGTGGYTYNASRRRYSLSYTLDLQYRAGVTLITSEQYATVAVGAKLGEAISRVDPIARKVDIKFDWENWRGESELMEAIDRYPVDCQWDNVIGDLYFPPAIGIGEATAEMIAAEREANNHGGVWITNPKYQSGFTLDYHDDYVITHAYVTGMARTGHVCAPFYTTSLVVKSGGKKLTLGQTGEAVTPIGTKYRMLFPAQEKECKMAVVPDPHYQEPGNIVVTGCFL
Physico‐chemical
properties
protein length:1260 AA
molecular weight: 138038,49880 Da
isoelectric point:5,49385
aromaticity:0,10317
hydropathy:-0,24643

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VFR13140.1
1 1260
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0208
Central domain 11 213 204 0,8917
C-terminal 214 1260 1046 0,0422
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-213
C-terminal
214-1260

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPFM12
[NCBI] 		2528682 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VFR13140.1 [NCBI]
Genbank nucleotide accession
LR535911 [NCBI]
CDS location
range 83918 -> 87700
strand -
CDS
ATGAAAACGTATCCTTACGATCCTCGGGGTGTAAATCCGCACCCATCCAAGATGATGACGTTCAATCCGAAAAACACGTCAGGTCGAACACTTATTATGTGCAACTATTCATACAGTTCGTTCCGCCCAGTGGATACAGGTAAAATTCCACCGGCGGCAAGATTCTTTACTGGCGTGGTGGATGCAGGTTCAACGATTAATGAGATGAACAGCGCGATGAATCGTTATTACGCCACGTTCCTTGACTATGCGATTAACTATTCCGGCTTAAACCGCGCGTTTAGTTCCGACACAGAAGTGCGTTTGACTTACGCTAACCTGAACACGATGCCGACAAACGACTTGACGAAACTGATTACCGATCCGAGTACGCCGATTTATCACGGCGTGGGTGGTTTGCAGTCGACCGGCGAGTCGTGGACTGAGGATTTGTCTACCCGTCTCCGTCCTGACTATATTAAAACGATCAACTTTGAGCTGACGCTAACCGCGACAACAAAGACGCTGAAATACACCTTTTTCAGCCACGCGCGAACAGCGGACGGTATTTCGTTCGTGGGAACGATTAACATCGATTCTGGCTTGAACGGCGTTACTGGTTCCGGCCATGACTGGACGGCACTTAATCCATCGGTGCGCGGCGTGAGCACGTATGCGGGAATCGCGGTTAACTACGGACGTGCTGCACAGGTTGTTATGTTCATGCACCGTATTTCTGTACTCGTCGCACGCACCGCAGGGCGTATTACCACTCCAGGAACCGCAACAGCGGACAGTGTGCTAGAAACGGTAATTGGGTGTTGCCATCACTCGGCCACTGTCCACAACACATTCCCGATGTTCCAGAATAACGGCATTACCGCAACGTGGACACCTTTTCCGGCTGCTGATAAATGGACGTTTAAAACAACCAGTTTATCTGTAACCGATTATCGTTTTGCCGATTGGCGTTACGCGCAGGCTAGCAGCTATACGCCTATGTTGAAAGCGGACTACGATACTTACGGTACAGGCGGGCCTGTGTGGTCCACGGGTGCACCGGGTACAAAACGTATAGAGCATATCGAGGATGATAACGCCCATATTCGACGGGGCATGACGCAAGCTGAATTCGGATTTGTGGTTTTTGTAGAAATCCGCAACGTGACGCGTTTAGGTGAGTTTCGTGAATTAGGCGAAAACACGGCAGAAACTGAGACGATGACCAAAATAGGTTCCATCATCACCAGTGAAACCGGGTTTGGCGTGTATGTTGACGCGGCGGGCGATGCTGGCAAGTACATTATCTACGAAAATCCAGTACCTCTCTCCACATTTAACCTGGCGGAGCTATTCCCAGCGACGCACGAAGATGCTGATTACACCGACTGGATGGTTACTATTAAAGCGAACGATTATTTCGTTGGTCGCGAGTACAATTCAATCAACATTATTCGTTACGGTTTACCCGGCACAGATATCATTGAAAACGGCATCACCCGACAGGCGGACGCCATCACAGAGATAGAGAAGGTCGCGAAGACAGTCGACTCTGGTGCAGTACAGTTCGGCACCGCGGTTGACGATGCCACTCTGGCATTAGACGGTGGTGAGGTCATTCACACACACACTTCTGCTGCGTTCGGGATTAAGCGTGCAACAACGACGGAGTTCGGTTTTGTACAATTGCCGATTTCCCCGCTCCAACAAGCTGAGCTGGACAAGTATGCAGTCGTCGGGAGTTCTATTTACATCGATAAAACTAACTTTGGCTTATCGAACGTACAGAACGTCCCAGATCAGCAGTTTACGGGCAAGTTGGTTGCCGTTAAATCGTACATCAACGACATGCCACTGACTACTGAATTCGGCGATCGTGAGGACTTGGCCGCAACGCCGGCACTCATCAAGAAATTGGATTGTACCTTTGTTCCACCGGAGTCCGATGACCTTGGCCTGATGGCTGTCCGTTTGTTGGCCGGAACTTCCACAGCTACTGTAACCATTAACGGTAACGGTATTCAGTCTGTTCCGTTTATCCCTACTACGGTCGGGCCGTATTTGCCGGGTAACGAGTCAGGTGGCGATGGACTGTTTTACCAGCTCATCCTTTATCCGGATTCCCGTGGATTGGAGTTCAACGGTAAGAAACTGTTGGAACGCGATTCGCAAACCGTTAACGCCGGGAACAACCCGATTACATGGCAAAGTGGGGCTAATGAGTCTGAAGGCGTGGGTGCACAATTCACGGTTGACCCGAGGGTTATCCGTTTTATTGGCAACGGCACGTTCGGTATGAAGCCTGGCCTGACTTCGATAACGTCGGCAGTGGGTACCGAGCCGAAACTGTCAACGCTGGCGAATAAGCTTTTACGTTTACCGGCGGCTGCACAGTCTATCGCGACACTGGTATACGGAAAAACGCAACCGCAGCTGACAGATTACGTTAACAATCTGTTCCCACATCGCGATTCGTGGGGCGCAATCCGTGCTTTGGAGAATAACGGTATTGCTTCGGAGATTGTCGATAAACTGTACCGTGATGCACCGGCACATGCGCACGTGCCGCGCAAGGATAAAGGCGCACCGGCACCTGACGTTAACAATGACGTGTACCAGCTGCTGGTAAAATATCACCAGGGCGTCAACCTAAACTGGTGGGCAGGTGAGAACGATTACGTCCAGATTCGTTCATTACCGAGCGAATTTGCGCCAGGGTATCAGAAAACTGATGTCGCAAAATGGTTGAAGTTTAAATCCATCACCGTTAAAACAAGCAAGCAAACCGTTAACTACAGCTTTAACGTTGACAACCCACCCGAGTTGGCGGGTGAGGTTGAGTTTAGCGTGGTCAGACGCGAAGGTAACGGCGTTTACGAAGCGATTGGTTCCGGTTCGTCCAATTACAGCTATACGTTGACGACTGGCCTGACCGATACTGGGGCGAGTATCCTGCGTCTTCAGTTGAAGCAACGCGCGATTTATCTTACTTTAACGACACCGGAAACAACGTTGAACCCAGGCGAGTTGATCGATTGGATGCTCTGTTACGCAAACGGCCAGAATACGACATTCGATGCGTATTCGTTAGCGGTAAAATACCGTTTACCGAGCATTCCGTACGACGGTACTGGCGGCTACACGTATAACGCGTCACGTCGTCGTTATTCGTTATCTTACACGTTAGACCTTCAATATCGCGCCGGTGTCACGCTTATCACATCCGAGCAGTATGCGACTGTTGCGGTTGGTGCTAAGCTCGGTGAAGCGATCAGTCGCGTTGACCCGATTGCTCGTAAGGTCGATATTAAGTTCGACTGGGAAAACTGGCGTGGCGAATCCGAGTTGATGGAAGCCATAGATCGCTATCCCGTTGACTGCCAATGGGATAACGTCATTGGGGATTTATATTTCCCACCCGCAATTGGCATCGGTGAAGCCACTGCAGAAATGATCGCCGCAGAACGAGAAGCGAATAATCACGGCGGCGTGTGGATTACCAACCCGAAATATCAGAGTGGCTTTACACTCGATTACCATGATGATTACGTCATCACCCATGCGTACGTTACGGGCATGGCCCGCACTGGTCATGTTTGCGCCCCCTTTTATACCACATCCCTGGTGGTCAAGAGTGGCGGCAAGAAATTAACATTAGGGCAGACCGGTGAAGCGGTAACGCCGATCGGTACTAAGTACCGGATGCTGTTCCCCGCACAAGAAAAGGAGTGTAAAATGGCTGTCGTCCCTGACCCGCACTATCAAGAACCGGGGAATATAGTAGTCACTGGCTGTTTCCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3631dc3f2cb3599f035189a47bd5957239a7cda1cf75bb0bdc516b4424725b6a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2712
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50