Protein

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Genbank accession
AGH32168.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,67
Protein sequence
MTMVYFLSSDGKTKVGLDSESTVTVSMPSTVTKSSISSGKAVSHEVIEGNVTITVSGIVTYSKSKVQEDNLDPIELQEELQKARRLSRKFTLYMAEDGGLPLLQNYDNCVISNVNVTAATYSNAVAVDISFEQVFVSEAAKKAYLKPKRSSATAATTNSPSDTGQGTKTRAEEEDNRTMAVAVVEEVFDIRVGN
Physico‐chemical
properties
protein length:194 AA
molecular weight: 20933,20550 Da
isoelectric point:5,02897
aromaticity:0,05670
hydropathy:-0,26392

Domains

Domains [InterPro]
DC_0628
STR
1–187
DC_0628
IPR048494
ATT
20–141
IPR048494
AGH32168.1
1 194
Architecture
STR
ATT
STR
STR 1-19 | ATT 20-141 | STR 142-187 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 11895-B1
[NCBI] 		754075 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH32168.1 [NCBI]
Genbank nucleotide accession
HQ634157 [NCBI]
CDS location
range 63667 -> 64251
strand -
CDS
ATGACAATGGTATATTTTCTATCTTCTGATGGAAAAACAAAAGTTGGGTTAGATAGTGAATCTACGGTGACGGTGAGTATGCCGTCCACTGTAACAAAATCTAGTATAAGTAGTGGAAAGGCAGTTAGTCACGAGGTGATTGAAGGTAATGTAACGATAACTGTAAGTGGTATTGTCACGTATTCAAAATCTAAGGTGCAAGAAGATAACCTTGACCCTATAGAATTACAAGAAGAGTTACAGAAAGCTAGAAGACTCAGTAGAAAATTTACCTTGTATATGGCAGAGGACGGTGGATTACCTCTTCTGCAAAACTATGACAATTGTGTAATATCTAATGTCAACGTAACAGCAGCCACGTATTCAAATGCTGTTGCTGTGGATATCTCTTTTGAGCAAGTGTTCGTATCAGAAGCAGCAAAAAAAGCTTACCTGAAACCAAAACGTAGCTCAGCCACAGCAGCCACAACTAATTCACCTTCTGATACAGGACAAGGTACAAAGACTAGAGCAGAGGAAGAGGATAATAGAACTATGGCTGTTGCGGTGGTAGAAGAAGTTTTTGATATAAGGGTGGGAAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
96f5cc107773114c366a74e4628852051c8c6da8f56049bcee2a7a20b8020419
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7707
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage 11895-B1 Henn,M.R., Wharam,S., Gilg,I., Martinez Martinez,J., Wilson,W., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank