Protein

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Genbank accession
YP_009134012.1 [GenBank]
Protein name
tail collar protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MANYTYERSKYGGCVGSILVHTTPAISSSNDPTTAQFKDNIPAGYLKCDGSVLLAKDFLALSRVLGVGDQCRFKREISQVRNADPSISDLGQFQLPDLGSKVIIGGRGTGAYNNDFVDREDLNAAATNRVGPQIEVISNFGSQISANYVGSARVTASGTLNMLGNPRYRLDRNTSETELNIENFQGHLHRANQTYLNYSTSHQVGGEGGKDNALRLGNSGAGNQTDFTFESGRESIHDHRIEKPIAYTSNFTYSYPQKDIDMSGVLATVDIDVSNDEKLDQLVTPFILVEYIIKF
Physico‐chemical
properties
protein length:295 AA
molecular weight: 32252,35530 Da
isoelectric point:5,39268
aromaticity:0,08475
hydropathy:-0,42136

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014j
[NCBI] 		1493514 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus tusconj
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009134012.1 [NCBI]
Genbank nucleotide accession
NC_026926 [NCBI]
CDS location
range 31806 -> 32693
strand +
CDS
ATGGCAAATTACACATACGAAAGATCAAAATATGGAGGATGTGTTGGCAGTATACTAGTACACACTACTCCCGCAATTTCTTCATCCAATGACCCCACTACTGCTCAATTCAAAGACAATATTCCAGCAGGGTATTTGAAGTGTGATGGGTCTGTTTTATTAGCAAAAGATTTTTTGGCATTATCTAGAGTTCTTGGTGTTGGAGATCAGTGCAGGTTTAAAAGAGAAATTTCACAGGTTAGAAACGCTGATCCTTCTATTAGCGATTTGGGGCAGTTTCAATTGCCTGATTTGGGATCTAAGGTAATTATTGGTGGTAGAGGAACTGGAGCATATAATAATGATTTTGTGGACAGGGAAGATTTAAATGCTGCTGCAACAAATAGAGTAGGACCACAAATTGAAGTTATCAGTAATTTTGGCAGTCAAATTAGTGCGAATTATGTAGGATCTGCTCGTGTTACTGCTAGTGGGACACTCAATATGTTGGGCAATCCTAGATATAGATTAGACCGAAATACTTCTGAAACTGAATTAAATATTGAAAATTTTCAGGGACATCTTCATCGGGCAAATCAAACATATTTAAACTATAGTACTAGTCATCAAGTAGGTGGAGAAGGCGGTAAAGATAATGCGCTAAGATTGGGAAATAGTGGTGCTGGTAATCAAACTGATTTTACTTTTGAATCTGGTAGAGAATCTATTCATGACCACAGAATTGAAAAACCAATAGCATATACTAGTAATTTTACTTATTCATATCCACAAAAAGATATTGATATGTCTGGAGTACTTGCTACGGTTGATATTGATGTTAGCAATGACGAAAAATTAGATCAGTTGGTTACGCCTTTTATTCTTGTAGAATACATTATTAAGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef93b48e5a1a35789f7b2b0064fd092a157355588bdf4ae4043f2b99d9ce4dd6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4759
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank