Protein

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Genbank accession
AWN07844.1 [GenBank]
Protein name
putative long tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTETENVIHKNGIYDFNVTTQEDKPLQKAVFYTQDTGGTARLIFNIDKDNQDLGLSSAAELELAMILAKGTESESKYLVKPTIIDGVRGIAEYALTDSQISHAGTAIAELYIKYKNTQAMRVYKFEFEIKKALIDSDFFPVAEFYVERWDDYEKIFDESFERLNTKLDGVDKKADALKTQFDAMQPEQFAQKADLNAHLNNTDVHVTSADKTNWNAKETTASAQAKADKALADAKAFFELSSSVQSVTLTPKNGFVASQPLIARYIKFGNRFLVIVSGIVGKGTGSGTGICATLPTFLAPDASWNKLYSAAQQSTAASNQANIYLSVSADINIVGVGSVDVNTGLDGIIYLTKEVTT
Physico‐chemical
properties
protein length:357 AA
molecular weight: 39061,41800 Da
isoelectric point:4,97679
aromaticity:0,09524
hydropathy:-0,21429

Domains

Domains [InterPro]
DC_1215
STR
1–348
DC_1215
G3DSA:2.60.40.3350
ATT
13–136
G3DSA:2.60.40.3350 Coil
IPR018913
ATT
19–157
IPR018913
AWN07844.1
1 357
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-157 | STR 158-348 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage PSU-VKH-LP019
[NCBI] 		2202246 No lineage information
Host Listeria
[NCBI] 		1637 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWN07844.1 [NCBI]
Genbank nucleotide accession
MH341451 [NCBI]
CDS location
range 16967 -> 18040
strand +
CDS
ATGACTGAAACTGAAAACGTTATTCACAAAAACGGCATATATGATTTTAACGTCACAACGCAAGAAGATAAACCACTTCAAAAAGCTGTTTTTTATACGCAAGATACAGGCGGGACAGCTAGACTTATTTTTAATATAGATAAAGATAATCAAGATTTAGGATTATCGTCTGCTGCTGAATTAGAGCTTGCTATGATTTTAGCGAAAGGAACAGAGTCAGAGAGCAAGTATCTTGTGAAACCAACAATCATCGATGGAGTGCGAGGAATTGCAGAATACGCACTTACAGACTCCCAAATATCTCATGCTGGCACTGCTATTGCTGAATTATATATAAAATACAAAAACACTCAAGCGATGCGCGTATATAAGTTTGAATTCGAGATAAAAAAAGCATTAATAGATAGCGACTTTTTCCCGGTGGCAGAATTTTACGTAGAGCGCTGGGATGATTACGAAAAGATATTCGATGAATCGTTCGAAAGATTAAACACTAAATTAGATGGCGTAGATAAAAAAGCGGATGCTTTAAAAACACAATTTGATGCTATGCAGCCCGAGCAATTCGCGCAAAAAGCAGACTTAAATGCCCATTTGAATAACACGGATGTTCACGTTACGTCAGCGGATAAAACGAACTGGAATGCCAAAGAAACAACGGCTAGCGCACAGGCTAAAGCAGATAAAGCGCTTGCTGATGCAAAAGCTTTTTTTGAACTATCTAGCTCTGTACAAAGTGTTACTTTGACGCCGAAGAACGGATTTGTTGCAAGTCAGCCTTTAATAGCTCGATACATTAAGTTTGGCAATCGGTTTCTAGTCATTGTTAGCGGAATTGTAGGCAAAGGGACTGGAAGTGGAACTGGCATATGCGCAACGTTACCAACTTTTTTGGCTCCTGATGCGAGCTGGAATAAACTTTATTCCGCTGCACAGCAGAGTACGGCAGCAAGTAATCAAGCGAATATATATCTAAGTGTGAGCGCTGATATAAATATCGTTGGAGTTGGTTCGGTAGACGTGAACACCGGACTTGATGGCATAATTTATTTAACTAAAGAGGTGACAACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c87a02d7fe41bd9346cd1642627490a05c73a9fbc63328b901ec747723fc7a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8457
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequences of 3 Listeria phages newly induced from lysogenic isolates of Listeria monocytogenes from food and food processing environment Vu,H.T.K., Stasiewicz,M.J., Benjakul,S. and Vongkamjan,K. 2018-07-05 — GenBank