Protein

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Genbank accession
YP_010667278.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTPTQNGIPSSTAIDVRFNAEKLDEIINSDENTYTDRFGNQRLTAKGVAAAVQETLNVLTGGDGSSIINLPYGGKVSNLQTFLSCDMFGIENTGDVDVTDKLLALIQLSTLTGIPIKQKSGEYLISGNAKFNWIIDNKKTDLGGMKIIPAADFTGTFWISQSSGLVNHASGSSVVTKLNANASTDFLSGNGCLDSLGSDTTLNDSMVIMNFSDDLYVYNSTQTQAGAKTQKLAHVTRISANGKMDNVFPYNGTSITSISALPIQAGFSEFIMPDVDYRYGPRPIFFQFFYVSNLIIKEGRILNKPITEIGSRHVIDIQYYYNTYVDFIYDAHPTASFSSSDQTTIYASYTLHHGWGAKLYVRNVNAFGYGWGSISAAGWIADTIFDNCSANNFDSHNPSIGYYKLVNCKIGDGAAVFLGTKNSTLEILDTVYELGRGSGDPYYGKFLFPSLVQARTTSGGITDGTLIMRNVRVRGFWKYYSLASNGEGSIVQGAADNYTSLPTGSQMAGELFNKIDIDGLTIETPEASSCLQNIYWINRDRTVTPPMNIRFDNVTYAAGGTLKIDFTNTKPRASNTSASTDTMFEPIDMKVSMNNVGVDNLIIKRPSYGFQHNIRLDARRLHNPNYNGTPTLVRISQRGSYNFNDCELSRFITNDGTQEANQRVEINMRGGSVKSGTNLPLTTADSAFLHRLKASGVSFSGDYSLSSVTSSNLNLAQWFRLSDCSYYNNSGTPISSLMIWNTGVNNSSWSGALYVAKGNCLQATHLQSGNTFFDVFKIDYPGSGILARSIATNITSSVNTLSGTTSVSVSGTDYSGTSSTQMNSFIDRYTVGTRGVQAYISGIFSQLSLTSIYVS
Physico‐chemical
properties
protein length:856 AA
molecular weight: 93153,88090 Da
isoelectric point:5,93015
aromaticity:0,10514
hydropathy:-0,19801

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010667278.1
1 856
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,9830
Central domain 100 728 630 0,9813
C-terminal 729 856 127 0,9402
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-99
Central
100-728
C-terminal
729-856

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Miami
[NCBI] 		2767581 Uroviricota > Caudoviricetes > Chimalliviridae > Miamivirus miami >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010667278.1 [NCBI]
Genbank nucleotide accession
NC_070950 [NCBI]
CDS location
range 102753 -> 105323
strand -
CDS
ATGACGACTCCAACACAAAATGGTATACCCAGTAGCACCGCTATAGATGTTAGATTTAATGCCGAAAAGTTAGATGAGATCATTAATTCCGATGAGAATACCTATACTGATCGTTTTGGTAACCAGAGATTGACCGCTAAGGGGGTAGCGGCGGCCGTCCAGGAAACCCTGAATGTTTTAACCGGAGGGGACGGGTCGTCAATTATAAATCTTCCTTATGGAGGTAAAGTCTCTAACCTTCAAACATTTCTTTCCTGTGACATGTTTGGTATAGAGAACACGGGGGATGTTGACGTCACCGACAAACTTTTAGCCCTTATTCAATTGTCGACATTGACGGGCATTCCTATAAAACAAAAATCTGGTGAGTACTTGATTTCCGGTAACGCCAAGTTTAACTGGATCATCGATAATAAGAAGACCGATTTAGGGGGAATGAAAATTATTCCGGCGGCTGATTTTACCGGGACTTTCTGGATCTCTCAATCGAGCGGATTAGTTAACCATGCCTCCGGATCTTCCGTGGTAACTAAGTTAAATGCTAATGCCTCCACAGACTTCTTAAGCGGAAACGGTTGTTTAGATTCGTTGGGATCGGACACGACTTTAAACGACAGCATGGTCATTATGAATTTTTCAGACGACCTATATGTTTATAATAGCACACAAACCCAAGCTGGCGCAAAAACTCAGAAACTCGCTCACGTAACCAGGATAAGCGCTAACGGCAAAATGGATAACGTCTTCCCTTACAACGGGACGTCGATTACTAGCATATCGGCGCTACCTATCCAGGCTGGTTTCAGTGAATTTATTATGCCGGACGTCGACTATCGTTATGGACCTAGACCTATATTCTTCCAGTTCTTTTATGTGTCCAACTTGATCATAAAAGAGGGGAGAATACTCAATAAACCGATTACGGAAATAGGATCACGTCACGTTATCGACATTCAGTATTACTACAACACCTACGTGGATTTCATCTACGACGCTCACCCAACCGCTTCCTTTTCTTCCTCGGATCAAACGACCATTTATGCATCTTACACACTCCACCATGGGTGGGGGGCGAAGTTATACGTAAGAAACGTAAACGCGTTTGGCTACGGATGGGGGTCGATATCCGCGGCCGGTTGGATAGCCGATACCATTTTTGATAATTGCTCGGCCAACAACTTCGATAGTCATAACCCAAGCATCGGATATTACAAACTTGTAAACTGCAAGATTGGTGACGGAGCTGCTGTTTTCTTAGGTACTAAAAACTCAACTCTCGAGATACTTGACACAGTATACGAACTGGGGAGGGGATCCGGAGACCCTTACTACGGAAAATTTCTTTTCCCTTCACTTGTGCAGGCCAGGACTACTTCCGGAGGAATCACCGATGGGACGCTGATTATGCGTAACGTCAGGGTCAGAGGATTTTGGAAATATTACAGTTTAGCGTCCAATGGAGAAGGGTCCATTGTACAGGGAGCCGCCGATAATTACACTTCTTTACCTACTGGGTCTCAGATGGCTGGGGAGCTATTTAATAAAATAGATATTGACGGCTTGACTATTGAGACTCCGGAAGCTTCTAGTTGCCTTCAAAATATTTATTGGATAAACCGCGACAGAACGGTTACCCCTCCTATGAATATTCGATTTGACAACGTTACCTACGCCGCCGGCGGGACGTTAAAAATTGATTTCACCAACACGAAGCCCAGGGCAAGCAATACTTCTGCATCGACCGACACTATGTTCGAACCTATCGACATGAAAGTCAGTATGAACAACGTAGGGGTGGATAATTTAATTATCAAACGTCCATCTTACGGATTTCAACACAATATTAGGCTCGACGCTAGGAGATTACACAACCCCAATTACAACGGCACCCCCACCCTAGTGAGAATCTCACAAAGGGGGTCCTATAATTTCAACGACTGTGAGTTATCAAGGTTCATTACCAACGACGGCACCCAGGAAGCCAATCAACGTGTAGAAATTAACATGAGGGGAGGGAGTGTCAAATCAGGGACTAATTTGCCTTTAACGACCGCCGATTCGGCGTTCCTTCACAGACTGAAAGCGTCAGGGGTAAGTTTTTCCGGCGACTACTCGTTAAGTTCGGTCACATCATCTAATTTGAATTTAGCCCAATGGTTCCGGTTAAGTGACTGCTCCTATTATAATAACTCAGGTACGCCAATTTCTTCTCTGATGATCTGGAACACCGGAGTAAATAATAGTAGTTGGTCCGGGGCTTTATATGTGGCCAAAGGAAATTGTCTGCAGGCCACCCATTTGCAATCCGGTAATACCTTTTTTGATGTTTTTAAAATTGACTATCCCGGAAGTGGTATTTTGGCGAGATCCATCGCCACTAATATTACCAGTTCAGTCAATACTCTATCGGGAACAACCTCCGTGTCGGTTTCAGGGACTGACTATTCAGGAACTAGTTCGACCCAAATGAATAGTTTTATTGATCGCTACACCGTAGGGACGCGAGGTGTTCAGGCGTACATTTCAGGGATATTCTCCCAGCTATCGTTAACTTCCATTTATGTAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8ecdc75e41acef6f8defc74da810747b1e52d55deff4394195d1e39ee83f4f49
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3181
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumoniae phage Miami Mora,D.A., Lessor,L., Gill,J. and Liu,M. 2021-01-28 — GenBank