Protein

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Genbank accession
QDB71403.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTNIFPETLAPNFFHVDKLPDYGLKLFENELGREIRRYTEDTGYKTELKIQYNGLRSDEVKALTAFYLQVKGTFDKFTLPINFYRSPSSITNSLTNLSDTTEWRFMNPPIIQTVISNIYTVEIRLLSLKDSLNPDSARIIGFVNSVNVDFILPTILIPQQTQVRELVPIALEFIASSIYLNQSVTATSINLTLETSELTFTTSTSGSVDSRSIQSLSLSFVASQTGFGILNSFEQMPSIIVSGTFPSLARYIHLVNTASGVASTILPSDAPDDTTIIYSDYAGTSTSSPTGFGLNAFTLNAPVGQTIQGQSRRVLNVENTSIQVIKKGNRWTIVGTELATGNSSGGSILVSDEGTQLTATATSLNFTGAGVTATNSGGAVTVNVTGGVIVNEPIAVVVASLTHLLTNPSFESPSILNNTFSVETVPGWGQCRIGRGDSGGFSPPVPFPNLSQIFIAQGGITLTSTPFPIPSNCGAIRFSFWHAPRRGFPYDRNIQAFINETVVLNFNPSSSGEWVKATTAWLAVNGGTNVTIQIVFTNLSAGDMTTFVDHVEVEGQFR
Physico‐chemical
properties
protein length:558 AA
molecular weight: 60250,10520 Da
isoelectric point:5,05284
aromaticity:0,09319
hydropathy:0,05735

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Microcystis phage Mic1
[NCBI] 		2587456 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cyanobacteria
[NCBI] 		1117 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB71403.1 [NCBI]
Genbank nucleotide accession
MN013189.1 [NCBI]
CDS location
range 35584 -> 37260
strand -
CDS
ATGACTAATATTTTTCCTGAAACTCTTGCTCCTAATTTTTTCCACGTCGATAAATTACCAGATTATGGTTTAAAACTCTTTGAGAACGAGTTAGGACGGGAAATTCGCAGATATACTGAAGACACAGGTTACAAAACGGAGTTAAAAATACAATATAACGGGCTTAGAAGTGATGAGGTTAAAGCTTTAACGGCATTTTATCTCCAAGTTAAGGGTACATTTGATAAGTTTACTTTGCCAATAAATTTTTACCGCAGTCCTTCTAGTATAACAAATTCTTTAACTAATTTATCTGATACGACCGAATGGCGATTTATGAACCCGCCTATAATTCAGACAGTTATTAGCAATATTTACACCGTAGAAATAAGACTATTATCACTAAAAGATTCGTTAAATCCGGATAGTGCTAGAATTATAGGTTTTGTTAATAGTGTAAATGTAGATTTTATTTTACCTACTATATTGATTCCACAACAAACACAGGTTAGGGAATTAGTTCCTATAGCTTTAGAATTTATCGCATCTTCAATATATTTAAACCAGAGTGTAACTGCCACGTCTATAAACTTAACGTTAGAAACTTCAGAACTAACTTTTACCACTTCTACTTCTGGTTCTGTAGATAGTCGCTCAATCCAAAGTTTAAGCCTTTCTTTTGTGGCTTCACAAACAGGCTTTGGAATATTAAACAGTTTTGAACAAATGCCCAGTATAATTGTTTCAGGAACATTTCCAAGTTTAGCACGTTATATACATTTAGTTAATACAGCTTCTGGTGTAGCATCCACAATATTGCCTTCGGATGCTCCTGATGATACAACTATTATTTATTCTGATTACGCTGGAACTTCTACTAGCTCACCTACAGGTTTTGGTTTAAATGCGTTTACTTTAAATGCACCAGTAGGACAAACAATACAAGGTCAAAGCCGTAGAGTGTTAAATGTTGAAAACACTTCTATTCAAGTAATTAAAAAAGGAAATAGATGGACAATTGTTGGAACAGAATTAGCTACTGGAAATTCTAGTGGCGGCTCTATCTTAGTCTCAGATGAGGGGACACAACTTACTGCTACCGCTACCAGTCTTAACTTCACTGGGGCAGGTGTGACCGCTACCAATAGCGGGGGGGCTGTTACTGTTAATGTAACTGGCGGCGTTATTGTCAATGAACCCATAGCTGTTGTTGTTGCTTCCCTAACCCACTTACTCACCAATCCTAGTTTTGAATCACCTTCAATATTAAATAATACTTTCAGTGTTGAAACTGTACCGGGATGGGGTCAATGTCGGATAGGAAGAGGAGATAGTGGAGGTTTTTCCCCACCAGTCCCCTTTCCAAACTTAAGCCAAATCTTTATTGCACAAGGAGGTATTACTCTCACATCAACCCCCTTCCCTATTCCATCTAACTGTGGAGCTATACGTTTTTCGTTCTGGCACGCCCCTCGTAGAGGATTCCCTTATGACCGGAACATACAGGCTTTCATCAACGAAACTGTCGTATTGAACTTCAATCCTTCTTCATCGGGGGAATGGGTCAAGGCTACTACTGCTTGGCTGGCTGTCAATGGCGGTACAAACGTTACTATCCAAATAGTATTTACTAACCTTTCTGCTGGTGATATGACCACGTTCGTTGACCATGTTGAGGTTGAAGGACAATTTCGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
52fa9a9de76e543dde56a6285bccb0f0f75dcb52a0b17e2112129a1cae9a6283
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4704
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of the freshwater cyanosiphophage Mic1 reveals an ancestor of mitochondrial DNA polymerase gamma Yang,F., Jin,H., Wang,X.Q., Zhang,J., Jiang,Y.L., Cui,N., Chen,Y.X., Li,W.F. and Zhou,C.Z. 2020-04-08 — GenBank