Protein

View in Explore
Genbank accession
YAV94690.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,57
Protein sequence
MSEVKTSFRASYGLDAAGEKVINVAKADKTVMTDGVNVEYLIQENTTQQYDPSRAYEKGFIVEFNGRLWMAEQNIAKPAGTFFEGYWKPLRTDPKWYPFDSGKYQLKVGDYISVDTRAGLDVELTLPTSPAPQEGDTISIKDIGGLTGYTSVIVIAPVESIIDKGASIPQKRMTIPFSEWTFVYTKKQWSLFDGDEAPVARTVVPGGPIRVQSGETIIRNYDRFAPIVLTFPKFANNGDIIHFVGMNQNSVPYYHLELNTFDSNTSIMSPGIHREIFYRSLSGYFIYNSSSSTWVLFDTDTVDRLRTVSTDTDLFPNETVTVVGKDNVTAQTIKLTLPDNVQPGDQITIALNYMRKAQTVNIVPKGTDMILTNKNLTQFPKRSSYPPDGNWVNTNILSYNGNSDYPPVIKFAYIDMGPIKQWLMVDCLPALERVDPSTDSTRGRLGVIALATQAQANLDKSVITAEAKEVAITPETLSNRTATEARQGIAKISTRAQNQLNTDDANYNDFDIVTPLKLNQKQATETMRGLAEIATQAETDSNTDDTRIITSKKLDGRRARTDLAGVAKLVAAGGVAPVKNGTNTRDTAGTGIYDHSDYVNIVTPKTLREFYSTEMALGTVYLANSAEVISGAASVAKYPLAVTPETLHTKTATDGRIGFTQVANQTEVNAGTDYFKYVTPKTLNDRKATEALTGIAKLATQTEFNAGTAGLISGPDKIKAYLSTPSRTAVVAASGLTQAGNLWTTTTFDIVAPTETQRGTTRLATQTEVNAGTDDNTVVTPKKLHAKKATTAAEGIIRIANTAETIAGTSGTTAVCPVNLKQVIQVETSWEASASLRGPVKISSGSITFVGNDTVGSTADVETYAKTGYAISPYELNKTLVNYMPLKAKAVDSDKLDGIDSTQFIRRDINQTVEGSLTFTSPTLFNDRVDVREMLEVGKTSGESLNTDNGKLRMVSGAVAPRAWAFAIHDGNVNGVGSSTLKFGYKYLTAQPGPIDIVAYEIHHSGAIKFNNTLNVVGATTINNTLNVSGIVSTDSVGFRIAGFDALTAVSGQTKVGTTTRGLDLIATDAAFIRALDSGTVYTVMTTKNRAGILDPLYVKKSGDTMTGRLNVSQPITATIPQSLATPNAVPNSNNFGTWTIDITDPAIYNTMRPYLVGVYAKNEETGATLPWYDKYDEFNGPGTLSQFGSSASNGSGTYQIWAPRPPADKANLPGHIAGTMWSRQWNPATNRWDGWGRMFTNNHPPLPQDIGAMSNNGSVFDSMRIRDWIQIGNLRIYANPETKTVRFDWIE
Physico‐chemical
properties
protein length:1292 AA
molecular weight: 140378,99820 Da
isoelectric point:5,88689
aromaticity:0,08359
hydropathy:-0,29543

Domains

Domains [InterPro]
DC_1986
ATT
7–135
DC_1986 DC_1209
IPR036240
STR
83–204
IPR036240 IPR048391
YAV94690.1
1 1292
Architecture
ATT
STR
STR
ATT
STR
ATT 7-135 | STR 136-204 | STR 345-1130 | ATT 1131-1240 | STR 1241-1280 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAV94690.1
1 1292
Domain Start End Length (AA) Confidence
N-terminal 1 368 368 0,7481
Central domain 369 601 234 0,1097
C-terminal 602 1292 690 0,4242
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-368
Central
369-601
C-terminal
602-1292

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM-MU1
[NCBI] 		3458857 Viruses >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAV94690.1 [NCBI]
Genbank nucleotide accession
PX093057 [NCBI]
CDS location
range 14967 -> 18845
strand -
CDS
ATGTCTGAAGTAAAAACAAGTTTCCGTGCGTCATACGGGTTGGACGCAGCCGGTGAAAAAGTAATCAATGTAGCAAAAGCTGACAAAACTGTCATGACTGATGGTGTAAACGTTGAATACCTCATCCAAGAAAACACAACCCAACAATATGATCCTTCTCGTGCATATGAGAAAGGATTTATTGTAGAATTTAACGGTCGCCTTTGGATGGCCGAACAAAATATTGCTAAACCAGCAGGAACATTCTTTGAAGGTTACTGGAAGCCATTGCGTACCGACCCTAAATGGTACCCATTTGATTCTGGCAAGTATCAATTAAAAGTTGGTGATTATATTTCTGTTGATACACGTGCAGGTTTAGACGTAGAATTAACTTTACCAACATCCCCAGCACCACAAGAAGGCGACACTATTTCCATTAAAGATATTGGCGGCTTGACTGGGTATACTTCTGTTATTGTTATTGCCCCTGTTGAATCTATTATTGATAAAGGCGCAAGCATCCCACAAAAACGTATGACTATTCCATTTTCTGAGTGGACATTTGTTTATACGAAGAAGCAATGGTCATTATTCGACGGCGACGAGGCACCTGTGGCTCGCACAGTTGTACCAGGGGGACCAATTCGTGTTCAATCAGGTGAAACAATTATTCGTAATTATGATCGCTTTGCGCCTATTGTGTTGACATTCCCAAAATTCGCTAATAATGGTGATATTATTCACTTTGTTGGCATGAATCAAAATTCAGTACCATATTATCATCTAGAATTGAACACATTTGATTCTAATACAAGCATAATGTCTCCAGGTATCCACAGAGAGATATTCTATCGTTCACTAAGTGGTTATTTTATTTACAATAGCTCGTCATCTACTTGGGTACTTTTTGACACAGATACAGTAGATCGACTACGAACTGTTAGTACTGATACTGATTTGTTCCCTAATGAAACTGTCACAGTAGTCGGCAAAGATAACGTAACTGCGCAAACAATTAAATTGACTTTGCCTGATAATGTGCAACCTGGTGACCAAATCACTATTGCATTGAATTATATGCGCAAGGCTCAAACAGTTAATATCGTCCCTAAAGGGACTGATATGATTTTGACTAATAAAAATCTTACACAGTTCCCTAAACGTTCGAGTTATCCACCTGATGGCAATTGGGTCAATACCAACATTTTGTCATATAATGGCAATAGCGATTATCCACCTGTGATTAAGTTTGCATACATTGATATGGGGCCTATTAAGCAGTGGTTAATGGTCGACTGTCTTCCTGCATTAGAACGTGTAGATCCTTCAACAGATTCAACACGTGGAAGATTAGGTGTCATTGCATTAGCTACCCAAGCTCAAGCGAATTTAGATAAATCTGTTATAACAGCGGAAGCCAAAGAAGTCGCTATTACGCCTGAAACTTTATCAAATAGAACTGCTACCGAGGCTCGCCAAGGTATAGCTAAAATTTCAACTAGGGCACAGAACCAACTTAATACCGACGACGCTAATTATAATGATTTTGATATAGTTACTCCTCTCAAGTTGAATCAAAAACAAGCCACCGAAACTATGCGTGGTCTTGCTGAAATTGCTACTCAAGCTGAAACAGATAGCAACACCGACGACACAAGAATTATTACATCTAAGAAATTGGATGGGCGTAGAGCAAGAACAGATCTTGCAGGCGTAGCAAAACTCGTTGCTGCTGGCGGTGTAGCACCAGTTAAAAATGGCACAAATACACGAGATACTGCTGGTACTGGCATCTATGACCATTCAGATTATGTGAACATTGTAACTCCAAAAACATTAAGAGAATTTTATTCTACAGAAATGGCTTTAGGTACAGTGTACTTAGCAAATTCTGCTGAAGTTATTTCTGGTGCTGCATCAGTAGCGAAGTACCCATTAGCTGTTACTCCAGAAACATTGCACACAAAAACTGCTACAGATGGTAGAATCGGTTTTACCCAGGTTGCGAATCAAACCGAAGTTAATGCCGGCACCGATTATTTTAAATATGTTACGCCAAAAACATTAAATGATCGTAAAGCTACAGAAGCTTTGACTGGTATTGCTAAACTTGCAACTCAAACTGAGTTTAATGCTGGCACTGCAGGACTAATCTCTGGCCCAGATAAAATTAAAGCATATTTGTCTACACCTTCACGTACTGCGGTAGTTGCCGCATCTGGTTTGACACAGGCCGGCAACCTTTGGACTACAACAACATTTGATATTGTTGCACCTACTGAAACACAACGTGGTACAACACGATTAGCTACTCAAACTGAAGTTAATGCCGGCACTGATGACAACACTGTTGTTACTCCTAAAAAGTTACATGCTAAAAAGGCTACAACTGCTGCAGAAGGTATTATTAGAATTGCTAATACTGCAGAGACTATAGCTGGAACTTCTGGCACTACCGCTGTATGTCCAGTAAACTTAAAGCAAGTAATACAAGTCGAGACGTCTTGGGAGGCTTCAGCTTCTTTGCGTGGTCCGGTAAAAATCTCTAGCGGTTCGATTACATTTGTAGGAAATGATACGGTTGGATCAACAGCAGATGTTGAGACTTATGCTAAGACAGGTTATGCGATTTCGCCATACGAGTTGAATAAAACTCTTGTAAATTATATGCCGCTGAAAGCTAAGGCTGTAGATTCTGACAAATTAGACGGAATTGACTCTACTCAGTTCATCCGTAGAGATATTAATCAGACTGTTGAAGGAAGTTTAACATTCACTAGCCCTACATTGTTTAATGATCGTGTTGACGTACGTGAAATGTTAGAAGTAGGCAAAACTTCAGGTGAATCACTTAACACAGACAATGGCAAGCTGCGTATGGTTTCTGGTGCTGTAGCTCCTCGAGCTTGGGCATTCGCTATACACGATGGTAACGTTAATGGTGTTGGATCATCTACACTTAAATTTGGCTATAAGTACCTTACTGCTCAACCAGGTCCTATCGACATTGTTGCATATGAAATTCATCATTCCGGCGCAATTAAATTCAACAATACTTTAAATGTAGTTGGTGCGACGACAATAAACAACACACTAAATGTTTCAGGTATCGTAAGTACAGACTCTGTCGGATTCCGAATTGCTGGATTTGATGCGTTGACGGCAGTCTCAGGACAAACTAAAGTAGGTACTACTACACGCGGTCTAGACTTGATTGCAACTGATGCTGCATTTATCCGAGCTTTGGATTCAGGCACAGTATATACTGTAATGACAACAAAAAATCGTGCAGGGATTTTAGATCCATTATATGTCAAGAAGTCTGGTGACACTATGACTGGTAGATTAAACGTCAGCCAGCCTATTACTGCTACAATTCCTCAGTCTTTGGCTACGCCTAATGCTGTACCTAATTCTAACAACTTTGGTACATGGACAATCGATATTACTGATCCTGCAATTTATAATACTATGCGCCCGTATCTTGTAGGTGTCTATGCCAAAAATGAAGAAACTGGTGCTACACTACCATGGTATGATAAGTATGATGAATTCAACGGACCTGGTACGTTGTCTCAATTTGGATCATCTGCGTCTAATGGCTCAGGTACATATCAAATTTGGGCGCCACGTCCGCCAGCAGATAAAGCAAATCTTCCTGGACATATTGCAGGAACTATGTGGTCCCGTCAATGGAATCCTGCAACAAATCGCTGGGATGGCTGGGGTAGAATGTTTACAAACAATCATCCGCCGTTACCACAAGATATTGGCGCTATGAGTAACAATGGTTCAGTCTTTGATTCTATGCGCATCAGAGATTGGATACAAATTGGCAATTTAAGAATCTATGCGAATCCAGAGACAAAAACTGTTCGCTTTGATTGGATAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab8796955b7bd0b8a0fd8289e5f8fc48ac7a5a0bdfd02cf1264f0fc58b513be5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7639
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50