Protein

View in Explore
Genbank accession
BCG50114.1 [GenBank]
Protein name
PaaR repeat-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTGIVRKTDLSTGYTGKNEQNQIVPLGPRPATSGSQSVMMNGVPIVRVGDSWDVHPGGNGRPGVQQTGSPNIFVEGKAVARQGDTILDTNGQIDTNNVGSSNFTANS
Physico‐chemical
properties
protein length:107 AA
molecular weight: 11125,13440 Da
isoelectric point:6,53298
aromaticity:0,03738
hydropathy:-0,52150

Domains

Domains [InterPro]
G3DSA:2.60.200.60
STR
5–104
G3DSA:2.60.200.60
IPR008727
STR
32–86
IPR008727
BCG50114.1
1 107
Architecture
STR
STR 5-104 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BCG50114.1
1 107
Domain Start End Length (AA) Confidence
N-terminal 1 103 103 0,2646
Central domain 104 103 1 0,0206
C-terminal 104 107 3 0,8639
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-103
Central
104-103
C-terminal
104-107

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RP13
[NCBI] 		2743402 No lineage information
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BCG50114.1 [NCBI]
Genbank nucleotide accession
LC554890 [NCBI]
CDS location
range 70845 -> 71168
strand -
CDS
ATGACAGGAATAGTTAGAAAGACTGACTTATCTACTGGATATACTGGTAAGAATGAACAGAATCAGATTGTACCACTAGGACCACGTCCAGCTACTAGTGGATCACAATCAGTAATGATGAATGGAGTGCCTATTGTTAGAGTAGGTGACTCATGGGATGTACATCCAGGTGGTAATGGCAGACCTGGCGTACAACAAACTGGATCACCTAATATCTTCGTAGAAGGTAAGGCAGTAGCTCGTCAAGGTGATACTATTTTAGATACTAACGGGCAGATTGACACTAATAATGTTGGATCTAGCAATTTTACGGCAAATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
74bbac3a25dd13997ccf321f4e1aaaed391e965491f8728debbc5ef1322cfd12
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8250
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a phage RP13 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2010-03 — GenBank