Protein

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Genbank accession
AIA08700.1 [GenBank]
Protein name
putative tail-fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,57
Protein sequence
MALRRDVTYSGRFTPATTERPQGGFKNRTSPTSEDGSYLEEQWLNDIDGFFASALMDAGVVPNGNVDEGGNSQLYDAVLRTREVTPLNDSWNGFFTRAHITQLPSPAGVPATSGSGGTAYSADDEWSIGNFASGGTISLDDDGLIFSQGIYKLFTFTAEQLSIIDVTKVPVYIVGQDGSRHFVKHNGTGVVVTKPDTTTLKVQVNNAILAELGITKVFSFFVTATVGFVQEKGDLALPSSLGFFEIEGLPQENGFIITNMVIGGNRVIIQNVTFGPITNGGSANVPWITPFPNAVFNCVASPLGLGSNAASSSMATGNPTVNGVNVYNWGTIQAKVRIFAIGY
Physico‐chemical
properties
protein length:343 AA
molecular weight: 36458,33440 Da
isoelectric point:4,75438
aromaticity:0,10204
hydropathy:-0,00496

Domains

Domains [InterPro]
DC_0226
STR
1–342
DC_0226
G3DSA:2.60.40.3940
RBD
250–343
G3DSA:2.60.40.3940
AIA08700.1
1 343
Architecture
STR
STR 1-343
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIA08700.1
1 343
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,9702
Central domain 121 319 200 0,1096
C-terminal 320 343 23 0,9987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-319
C-terminal
320-343

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 24
[NCBI] 		1500712 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIA08700.1 [NCBI]
Genbank nucleotide accession
KJ572844 [NCBI]
CDS location
range 41013 -> 42044
strand +
CDS
ATGGCTTTAAGACGCGACGTTACATACTCGGGGCGGTTCACGCCGGCAACTACAGAGCGCCCTCAAGGTGGGTTTAAAAATCGCACGTCACCTACTTCGGAGGATGGATCATATCTTGAGGAGCAATGGCTCAACGATATTGATGGATTCTTCGCTTCAGCATTGATGGACGCTGGGGTTGTCCCTAACGGTAATGTTGATGAAGGCGGTAATTCTCAATTGTATGATGCAGTTCTGAGAACCCGAGAAGTTACTCCGCTAAACGATAGTTGGAATGGTTTCTTCACGCGAGCTCACATCACACAACTACCATCACCTGCAGGAGTGCCAGCTACTAGCGGATCTGGCGGTACGGCATACAGCGCAGATGATGAATGGTCGATCGGTAACTTCGCAAGCGGGGGTACTATTTCGCTTGATGACGACGGTCTTATATTTTCTCAAGGTATCTACAAGCTATTTACGTTCACTGCTGAGCAGTTGTCGATTATCGATGTTACCAAAGTTCCGGTCTATATCGTTGGTCAAGATGGTTCGCGGCACTTTGTTAAACACAACGGAACGGGTGTGGTTGTCACAAAGCCAGATACCACAACTCTAAAAGTGCAGGTTAACAATGCAATTCTTGCCGAGCTTGGTATTACGAAAGTGTTTAGTTTTTTTGTAACTGCTACGGTTGGTTTCGTTCAAGAAAAAGGTGATCTTGCTCTACCGTCTTCGCTTGGATTTTTTGAGATCGAGGGTCTTCCTCAAGAAAACGGCTTTATCATCACAAATATGGTTATTGGGGGGAATAGGGTAATCATACAAAACGTAACCTTCGGCCCAATTACCAATGGGGGCAGTGCAAATGTACCATGGATTACCCCGTTCCCTAATGCGGTTTTCAACTGCGTAGCTTCACCACTGGGTCTGGGATCAAACGCGGCCTCTTCGTCGATGGCCACAGGTAACCCTACTGTTAATGGAGTTAACGTATACAACTGGGGTACAATACAAGCTAAAGTAAGAATATTTGCGATAGGTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
264b0d6a11f035a3949bffbaa685846b11506e2039ea55cbf3fc8caf919839bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6016
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequencing of Vibrio cholerae bacteriophage 24 Bhandare,S.G., Warry,A., Emes,R.D., Hooton,S.P.T., Barrow,P.A. and Atterbury,R.J. 2017-11-16 — GenBank