Protein

View in Explore
Genbank accession
XYS97289.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,69
Protein sequence
MTSTPTFTVSEILKTTNSNSSSPTIASGYGHSIDADGNTMVVGTYGGNRFFIYDYDGTSWNQVNEFSKPATAPGRFGMAVAISGEWIAVTDANYSTSFNATITMYRKVSGNWIEYTTITNPVTSPGYGFGQSIALKDGTLVIGKIEYTTSSAGGAFVYVWDGTNWVDQSGFLTVPSSEKRQSNQFLGADVAIEGDTIVVGGPGSNSGVSGGKGIAFIAKRIGTTWSVTEILKPSTSYNDAYGAKVKIQGTKVLIAATTGNATEAIPGQVFLYDISGSNATLEATFTVKSDTSQLIQDTLITTNALYGSDIDFSFDGSVIAVGAGNRYVNRGIVYFYEKVDGVWGVTALPTNSWLTASDSQFATGARFGNTMKFAADGLMIGAYGVKSTYWFK
Physico‐chemical
properties
protein length:392 AA
molecular weight: 41542,67760 Da
isoelectric point:4,93154
aromaticity:0,12245
hydropathy:-0,04464

Domains

Domains [InterPro]
IPR037293
STR
2–330
IPR037293
PTHR36220
Unmapped
2–356
PTHR36220
SSF82171
STR
25–336
SSF82171
XYS97289.1
1 392
Architecture
STR
STR 2-336 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYS97289.1
1 392
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1487
Central domain 11 306 297 0,9216
C-terminal 307 392 85 0,1006
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-306
C-terminal
307-392

Taxonomy

  Name Taxonomy ID Lineage
Phage Sinorhizobium phage Phosso
[NCBI] 		3435197 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS97289.1 [NCBI]
Genbank nucleotide accession
PV764938 [NCBI]
CDS location
range 93354 -> 94532
strand +
CDS
ATGACAAGTACACCAACCTTTACTGTTTCTGAAATTCTCAAAACAACAAATTCAAATTCATCGTCGCCTACTATAGCTTCGGGATATGGTCATTCAATCGATGCTGACGGAAATACTATGGTTGTGGGCACATACGGAGGGAATAGATTTTTTATCTACGATTACGATGGAACGTCGTGGAATCAAGTGAATGAATTTTCAAAGCCTGCTACTGCTCCTGGACGCTTTGGTATGGCCGTTGCAATTTCTGGTGAATGGATCGCTGTTACCGACGCTAACTATTCTACTTCTTTCAACGCAACAATAACAATGTATCGCAAGGTTAGTGGTAACTGGATCGAGTATACTACTATCACCAATCCTGTAACATCTCCGGGATACGGTTTTGGTCAATCCATTGCACTAAAAGATGGAACCCTTGTTATCGGTAAGATTGAATATACTACTAGCTCAGCTGGTGGTGCGTTCGTTTATGTTTGGGATGGCACAAATTGGGTCGACCAAAGTGGTTTCCTAACCGTTCCATCTTCCGAGAAAAGACAATCTAATCAGTTCCTTGGTGCTGACGTGGCTATTGAGGGCGATACGATCGTTGTTGGTGGTCCTGGAAGCAACAGTGGTGTATCTGGAGGTAAGGGTATTGCATTCATAGCTAAACGAATTGGGACTACTTGGTCTGTAACAGAAATCTTGAAGCCTTCTACTTCATACAATGATGCTTATGGAGCAAAAGTGAAGATCCAAGGAACAAAGGTGCTAATCGCAGCGACAACTGGAAATGCAACAGAAGCTATTCCTGGCCAAGTATTCCTATACGATATTAGCGGGTCTAATGCTACTCTAGAAGCAACATTCACTGTGAAATCTGATACTTCACAACTTATCCAGGATACCCTCATTACAACGAACGCACTTTATGGTTCTGACATTGATTTCAGCTTCGATGGCTCTGTAATCGCTGTTGGTGCCGGCAATCGCTATGTTAACCGTGGTATTGTGTATTTCTATGAAAAAGTTGATGGAGTGTGGGGAGTCACAGCACTACCTACAAACAGCTGGCTCACAGCCTCGGATTCGCAATTTGCTACTGGTGCACGTTTCGGTAACACTATGAAATTTGCAGCAGATGGTTTGATGATTGGGGCGTACGGAGTTAAGTCCACATATTGGTTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
feb97f4d29a8c3f4dc5721b828457f4f32cb5250885238d7c583502dd81d7e38
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8322
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50