Protein

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Genbank accession
XOD32454.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MIASEQEVLDGTNNSKIVTPATLATRLLYPNATETKYGLTRYSTNEETLEGSDNNSSITPQKLKYHTDDVFQNRYSSESSNGVIKISSTPAALAGVDDTTAMTPLKTQKLAIKLISQIAPSEDTASESVRGVVQLSTVAQTRQGTLREGYAISPYTFMNSVATQEYKGVIRLGTQSEINSNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGIAPEGDGSGALA
Physico‐chemical
properties
protein length:224 AA
molecular weight: 23643,98680 Da
isoelectric point:5,12986
aromaticity:0,04464
hydropathy:-0,34955

Domains

Domains [InterPro]
DC_0176
STR
1–224
DC_0176
SSF69349
STR
188–224
SSF69349
G3DSA:2.10.280.10
Unmapped
188–224
G3DSA:2.10.280.10
IPR015173
STR
188–224
IPR015173
XOD32454.1
1 224
Architecture
STR
STR 1-224
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage sb4
[NCBI] 		3387549 Viruses >
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD32454.1 [NCBI]
Genbank nucleotide accession
PQ666542.1 [NCBI]
CDS location
range 91973 -> 92647
strand +
CDS
ATGATTGCGTCAGAGCAAGAGGTTTTAGATGGAACTAATAATTCTAAAATCGTTACACCTGCTACATTAGCAACAAGATTATTGTATCCAAATGCTACTGAAACTAAATATGGTTTAACGCGCTATTCAACAAATGAAGAAACTTTAGAAGGCTCAGATAATAATTCGTCGATAACTCCACAAAAATTGAAATACCATACTGACGATGTATTCCAAAACAGGTATTCATCTGAATCATCAAATGGAGTTATTAAAATATCATCTACACCTGCGGCTTTGGCTGGTGTAGATGATACTACGGCAATGACTCCATTAAAAACCCAAAAACTTGCAATAAAATTAATTTCACAAATAGCTCCTTCAGAAGACACAGCATCAGAATCTGTTAGAGGTGTAGTTCAGTTATCAACTGTCGCTCAAACTCGTCAAGGAACTCTTCGCGAAGGATATGCAATTTCTCCGTATACCTTTATGAATTCTGTTGCAACACAAGAATATAAGGGTGTTATACGTTTAGGAACACAATCGGAAATTAACAGTAATTTAGGAGATGTTGCAGTAACAGGCGAAACATTAAATGGTCGAGGAGCTACTGGTTCTATGCGCGGTGTAGTAAAATTAACGACGCAAGCCGGTATTGCCCCCGAAGGTGATGGCTCTGGAGCATTAGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2853ecf28c65077f63bdc2b731cbaa55e8adcc47925b76f1302f3e4d1853d976
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8193
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50