Protein

View in Explore
Genbank accession
QRE00539.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MARKILYPFARSGDRTDVPDVSSGGFVGYDIGYGFDYQRQLGVDPLFKVVDRKTFNQYMYDVTSNIQLWQNQGHNQWFASGALPGDDGYPQNAMVKYGQDLFLSLADGNKTEPTTSGNQWEKQWFAKDVVGTVPCPYQGAAAASGDFRASPYTSSGVWGFDSDAKVAAHNNAPPTARAGVLQVRANPGFIVQIFRDGAGSVFVQGYSPANGWSNWRVVVGVCQVVRADSTNVDSSVNWNNLNYPGLYAVSSFGGTNAPPTTVGASDFGLVEVVSYATTNVFAQVVTKYLDANNTEVWYRTYNNGTWSGWVQGDGRNKVNKVGDTMTGRLTMVGPNPSYLNTPEVYFQIPGMPNGMCIRGSTESGRVGSIQVVNAAYNAVLFEMYNDGTFVCNTNRPTWAGAVPWDTGNFNPATKLPVRPGNGNNGYVENLNSSNNQYFGWNGNWYYQVDGTYLGVVWTNYNFVPGNYAAAYAWCQWQGDKSTEGPISNGGTGYEISGDRFLSGIGAATGESTANAIYMNGRTMRNN
Physico‐chemical
properties
protein length:526 AA
molecular weight: 57244,39440 Da
isoelectric point:5,23018
aromaticity:0,13688
hydropathy:-0,40589

Domains

Domains [InterPro]
DC_0930
STR
1–363
DC_0930 DC_2017
cd19958
STR
152–216
cd19958 cd19958
QRE00539.1
1 526
Architecture
STR
RBD
STR 1-363 | RBD 455-526
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QRE00539.1
1 526
Domain Start End Length (AA) Confidence
N-terminal 1 299 299 0,7783
Central domain 300 499 201 0,1406
C-terminal 500 526 26 0,6699
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-299
Central
300-499
C-terminal
500-526

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage BCSR129
[NCBI] 		2805746 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia
[NCBI] 		32008 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QRE00539.1 [NCBI]
Genbank nucleotide accession
MW460247 [NCBI]
CDS location
range 40576 -> 42156
strand +
CDS
ATGGCTCGCAAGATTTTGTACCCGTTTGCACGGTCCGGCGATCGGACCGACGTGCCTGACGTGTCGTCGGGCGGCTTTGTGGGGTACGACATCGGTTACGGTTTCGACTATCAGCGACAGCTGGGCGTCGATCCTCTGTTCAAGGTGGTTGACCGGAAGACGTTTAACCAGTACATGTACGACGTGACCAGCAATATTCAGTTGTGGCAGAATCAGGGCCACAACCAATGGTTCGCGTCGGGTGCTCTTCCGGGGGACGACGGATACCCCCAAAACGCCATGGTAAAGTACGGGCAAGATCTGTTCTTGTCCCTGGCCGACGGAAACAAAACTGAGCCCACTACCAGCGGAAACCAGTGGGAGAAGCAGTGGTTTGCAAAGGATGTGGTGGGGACCGTCCCATGCCCGTACCAAGGAGCTGCAGCTGCGTCGGGTGATTTTCGGGCGTCCCCGTACACTTCCTCGGGTGTTTGGGGCTTCGACAGCGACGCGAAAGTTGCCGCCCACAACAATGCTCCTCCCACTGCTCGCGCCGGTGTATTGCAGGTAAGGGCAAATCCAGGGTTCATCGTCCAGATTTTCAGGGACGGTGCTGGGTCGGTATTTGTTCAGGGGTACAGCCCCGCTAATGGGTGGTCCAACTGGCGTGTCGTGGTGGGTGTATGTCAAGTAGTGAGAGCCGACTCCACCAACGTCGATAGCTCGGTTAACTGGAACAACCTTAACTATCCGGGCCTGTACGCTGTCTCGTCTTTTGGCGGCACGAACGCGCCTCCCACTACCGTGGGAGCATCCGATTTCGGCCTCGTAGAAGTTGTGTCATACGCCACAACCAACGTGTTCGCGCAGGTTGTGACCAAATACCTTGACGCGAACAACACCGAGGTATGGTACAGAACCTACAACAACGGAACGTGGTCGGGGTGGGTTCAAGGCGACGGTCGCAACAAAGTCAACAAGGTTGGTGACACCATGACGGGCCGGTTGACGATGGTGGGTCCCAACCCGTCGTACCTCAACACTCCGGAGGTGTACTTCCAGATTCCGGGCATGCCCAACGGCATGTGTATCCGAGGGTCCACGGAATCCGGCCGGGTGGGTAGCATCCAAGTCGTCAACGCTGCGTATAACGCCGTGTTGTTTGAAATGTACAACGACGGCACGTTCGTGTGTAACACCAACCGGCCAACGTGGGCCGGTGCTGTTCCGTGGGATACGGGAAACTTCAACCCGGCAACCAAACTCCCTGTCAGACCGGGGAACGGTAACAACGGGTACGTAGAAAACCTGAACAGCAGCAACAACCAGTATTTCGGGTGGAACGGCAACTGGTACTACCAAGTGGACGGGACGTACCTGGGTGTTGTATGGACGAACTACAACTTCGTGCCGGGGAACTACGCGGCCGCCTACGCTTGGTGCCAATGGCAGGGCGACAAGTCCACCGAGGGGCCGATTTCCAACGGCGGCACCGGTTACGAAATTTCGGGCGATCGCTTCCTGTCGGGCATCGGGGCGGCAACCGGTGAGTCGACCGCGAACGCCATCTACATGAACGGCCGCACCATGAGGAACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff25e0b4929d01dde03ee804c8b4f9b7b75b2618f0ea3027f3b01e0775e7b8b3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7141
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50